Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC21.42■■□□□ 1.02
Ddx55Q6ZPL9 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ddx55Q6ZPL9 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ddx55Q6ZPL9 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ddx55Q6ZPL9 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Ddx55Q6ZPL9 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ddx55Q6ZPL9 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ddx55Q6ZPL9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ddx55Q6ZPL9 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
Ddx55Q6ZPL9 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Ddx55Q6ZPL9 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ddx55Q6ZPL9 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.41■■□□□ 1.02
Ddx55Q6ZPL9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ddx55Q6ZPL9 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ddx55Q6ZPL9 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.41■■□□□ 1.02
Ddx55Q6ZPL9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ddx55Q6ZPL9 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ddx55Q6ZPL9 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ddx55Q6ZPL9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ddx55Q6ZPL9 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ddx55Q6ZPL9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Ddx55Q6ZPL9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ddx55Q6ZPL9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Ddx55Q6ZPL9 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ddx55Q6ZPL9 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ddx55Q6ZPL9 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ddx55Q6ZPL9 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.4■■□□□ 1.02
Ddx55Q6ZPL9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Ddx55Q6ZPL9 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ddx55Q6ZPL9 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ddx55Q6ZPL9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
Ddx55Q6ZPL9 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.39■■□□□ 1.02
Ddx55Q6ZPL9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ddx55Q6ZPL9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ddx55Q6ZPL9 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Ddx55Q6ZPL9 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ddx55Q6ZPL9 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ddx55Q6ZPL9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Ddx55Q6ZPL9 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
Ddx55Q6ZPL9 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ddx55Q6ZPL9 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ddx55Q6ZPL9 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ddx55Q6ZPL9 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ddx55Q6ZPL9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ddx55Q6ZPL9 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ddx55Q6ZPL9 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ddx55Q6ZPL9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ddx55Q6ZPL9 Gm37352-201ENSMUST00000193908 2181 ntBASIC21.38■■□□□ 1.01
Ddx55Q6ZPL9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ddx55Q6ZPL9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ddx55Q6ZPL9 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ddx55Q6ZPL9 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ddx55Q6ZPL9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.38■■□□□ 1.01
Ddx55Q6ZPL9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ddx55Q6ZPL9 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Ddx55Q6ZPL9 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx55Q6ZPL9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx55Q6ZPL9 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx55Q6ZPL9 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
Ddx55Q6ZPL9 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Ddx55Q6ZPL9 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx55Q6ZPL9 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC21.37■■□□□ 1.01
Ddx55Q6ZPL9 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC21.37■■□□□ 1.01
Ddx55Q6ZPL9 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx55Q6ZPL9 Mtag2-201ENSMUST00000058665 714 ntBASIC21.37■■□□□ 1.01
Ddx55Q6ZPL9 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Ddx55Q6ZPL9 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx55Q6ZPL9 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ddx55Q6ZPL9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
Ddx55Q6ZPL9 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx55Q6ZPL9 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx55Q6ZPL9 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Ddx55Q6ZPL9 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Ddx55Q6ZPL9 Gm21814-202ENSMUST00000203277 873 ntBASIC21.36■■□□□ 1.01
Ddx55Q6ZPL9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx55Q6ZPL9 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx55Q6ZPL9 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Ddx55Q6ZPL9 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx55Q6ZPL9 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ddx55Q6ZPL9 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.36■■□□□ 1.01
Ddx55Q6ZPL9 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC21.36■■□□□ 1.01
Ddx55Q6ZPL9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx55Q6ZPL9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx55Q6ZPL9 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx55Q6ZPL9 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx55Q6ZPL9 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx55Q6ZPL9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Ddx55Q6ZPL9 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx55Q6ZPL9 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx55Q6ZPL9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx55Q6ZPL9 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx55Q6ZPL9 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ddx55Q6ZPL9 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx55Q6ZPL9 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx55Q6ZPL9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Ddx55Q6ZPL9 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Ddx55Q6ZPL9 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx55Q6ZPL9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx55Q6ZPL9 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ddx55Q6ZPL9 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms