Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.11■□□□□ 0.33
Smarcd3Q6P9Z1 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcd3Q6P9Z1 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Smarcd3Q6P9Z1 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcd3Q6P9Z1 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcd3Q6P9Z1 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcd3Q6P9Z1 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcd3Q6P9Z1 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcd3Q6P9Z1 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.1■□□□□ 0.33
Smarcd3Q6P9Z1 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcd3Q6P9Z1 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcd3Q6P9Z1 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcd3Q6P9Z1 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcd3Q6P9Z1 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Smarcd3Q6P9Z1 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.09■□□□□ 0.33
Smarcd3Q6P9Z1 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcd3Q6P9Z1 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Smarcd3Q6P9Z1 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcd3Q6P9Z1 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.09■□□□□ 0.33
Smarcd3Q6P9Z1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.09■□□□□ 0.33
Smarcd3Q6P9Z1 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Smarcd3Q6P9Z1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcd3Q6P9Z1 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcd3Q6P9Z1 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcd3Q6P9Z1 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcd3Q6P9Z1 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcd3Q6P9Z1 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcd3Q6P9Z1 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcd3Q6P9Z1 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.09■□□□□ 0.33
Smarcd3Q6P9Z1 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcd3Q6P9Z1 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.09■□□□□ 0.33
Smarcd3Q6P9Z1 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcd3Q6P9Z1 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Smarcd3Q6P9Z1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smarcd3Q6P9Z1 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smarcd3Q6P9Z1 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smarcd3Q6P9Z1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.08■□□□□ 0.32
Smarcd3Q6P9Z1 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcd3Q6P9Z1 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcd3Q6P9Z1 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcd3Q6P9Z1 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcd3Q6P9Z1 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.08■□□□□ 0.32
Smarcd3Q6P9Z1 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcd3Q6P9Z1 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcd3Q6P9Z1 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcd3Q6P9Z1 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Smarcd3Q6P9Z1 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcd3Q6P9Z1 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Smarcd3Q6P9Z1 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Smarcd3Q6P9Z1 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcd3Q6P9Z1 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Smarcd3Q6P9Z1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcd3Q6P9Z1 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcd3Q6P9Z1 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcd3Q6P9Z1 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcd3Q6P9Z1 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcd3Q6P9Z1 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Smarcd3Q6P9Z1 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Smarcd3Q6P9Z1 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Smarcd3Q6P9Z1 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcd3Q6P9Z1 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcd3Q6P9Z1 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Smarcd3Q6P9Z1 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Smarcd3Q6P9Z1 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcd3Q6P9Z1 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.07■□□□□ 0.32
Smarcd3Q6P9Z1 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcd3Q6P9Z1 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.07■□□□□ 0.32
Smarcd3Q6P9Z1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.07■□□□□ 0.32
Smarcd3Q6P9Z1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcd3Q6P9Z1 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcd3Q6P9Z1 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcd3Q6P9Z1 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcd3Q6P9Z1 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcd3Q6P9Z1 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcd3Q6P9Z1 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Smarcd3Q6P9Z1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcd3Q6P9Z1 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Smarcd3Q6P9Z1 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.06■□□□□ 0.32
Smarcd3Q6P9Z1 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcd3Q6P9Z1 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Smarcd3Q6P9Z1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcd3Q6P9Z1 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcd3Q6P9Z1 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Smarcd3Q6P9Z1 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcd3Q6P9Z1 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcd3Q6P9Z1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcd3Q6P9Z1 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcd3Q6P9Z1 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcd3Q6P9Z1 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcd3Q6P9Z1 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcd3Q6P9Z1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcd3Q6P9Z1 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcd3Q6P9Z1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.06■□□□□ 0.32
Smarcd3Q6P9Z1 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcd3Q6P9Z1 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcd3Q6P9Z1 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Smarcd3Q6P9Z1 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Smarcd3Q6P9Z1 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcd3Q6P9Z1 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Smarcd3Q6P9Z1 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms