Protein–RNA interactions for Protein: Q6P9P0

Slf2, SMC5-SMC6 complex localization factor protein 2, mousemouse

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf2Q6P9P0 Mir1199-201ENSMUST00000117015 119 ntBASIC23.19■■□□□ 1.3
Slf2Q6P9P0 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC23.19■■□□□ 1.3
Slf2Q6P9P0 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Slf2Q6P9P0 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Slf2Q6P9P0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Slf2Q6P9P0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Slf2Q6P9P0 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Slf2Q6P9P0 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC23.18■■□□□ 1.3
Slf2Q6P9P0 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC23.18■■□□□ 1.3
Slf2Q6P9P0 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Slf2Q6P9P0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Slf2Q6P9P0 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC23.18■■□□□ 1.3
Slf2Q6P9P0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Slf2Q6P9P0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Slf2Q6P9P0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Slf2Q6P9P0 Gm15565-201ENSMUST00000118890 427 ntBASIC23.17■■□□□ 1.3
Slf2Q6P9P0 Gm29994-201ENSMUST00000195495 1193 ntBASIC23.17■■□□□ 1.3
Slf2Q6P9P0 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Slf2Q6P9P0 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
Slf2Q6P9P0 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC23.17■■□□□ 1.3
Slf2Q6P9P0 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Slf2Q6P9P0 CT010444.2-201ENSMUST00000217877 1629 ntBASIC23.17■■□□□ 1.3
Slf2Q6P9P0 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Slf2Q6P9P0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Slf2Q6P9P0 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Slf2Q6P9P0 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Slf2Q6P9P0 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Slf2Q6P9P0 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Slf2Q6P9P0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Slf2Q6P9P0 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Slf2Q6P9P0 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Slf2Q6P9P0 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Slf2Q6P9P0 Gm37055-201ENSMUST00000191866 133 ntBASIC23.16■■□□□ 1.3
Slf2Q6P9P0 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Slf2Q6P9P0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Slf2Q6P9P0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Slf2Q6P9P0 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Slf2Q6P9P0 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Slf2Q6P9P0 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Slf2Q6P9P0 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Slf2Q6P9P0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Slf2Q6P9P0 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Slf2Q6P9P0 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC23.15■■□□□ 1.3
Slf2Q6P9P0 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC23.15■■□□□ 1.3
Slf2Q6P9P0 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Slf2Q6P9P0 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC23.15■■□□□ 1.3
Slf2Q6P9P0 Gm9484-201ENSMUST00000195892 1159 ntBASIC23.15■■□□□ 1.3
Slf2Q6P9P0 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC23.15■■□□□ 1.3
Slf2Q6P9P0 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Slf2Q6P9P0 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Slf2Q6P9P0 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Slf2Q6P9P0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Slf2Q6P9P0 Flg-201ENSMUST00000050758 1488 ntBASIC23.14■■□□□ 1.29
Slf2Q6P9P0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC23.14■■□□□ 1.29
Slf2Q6P9P0 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC23.14■■□□□ 1.29
Slf2Q6P9P0 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
Slf2Q6P9P0 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Slf2Q6P9P0 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Slf2Q6P9P0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
Slf2Q6P9P0 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Slf2Q6P9P0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Slf2Q6P9P0 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Slf2Q6P9P0 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Slf2Q6P9P0 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Slf2Q6P9P0 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Slf2Q6P9P0 Wnt10b-205ENSMUST00000226846 1204 ntBASIC23.13■■□□□ 1.29
Slf2Q6P9P0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Slf2Q6P9P0 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Slf2Q6P9P0 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Slf2Q6P9P0 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Slf2Q6P9P0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC23.12■■□□□ 1.29
Slf2Q6P9P0 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
Slf2Q6P9P0 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC23.12■■□□□ 1.29
Slf2Q6P9P0 Gm11927-201ENSMUST00000118472 759 ntBASIC23.12■■□□□ 1.29
Slf2Q6P9P0 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Slf2Q6P9P0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Slf2Q6P9P0 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Slf2Q6P9P0 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Slf2Q6P9P0 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Slf2Q6P9P0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Slf2Q6P9P0 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Slf2Q6P9P0 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Slf2Q6P9P0 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Slf2Q6P9P0 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC23.11■■□□□ 1.29
Slf2Q6P9P0 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Slf2Q6P9P0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Slf2Q6P9P0 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC23.11■■□□□ 1.29
Slf2Q6P9P0 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Slf2Q6P9P0 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Slf2Q6P9P0 AC107452.1-201ENSMUST00000227963 481 ntBASIC23.11■■□□□ 1.29
Slf2Q6P9P0 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC23.11■■□□□ 1.29
Slf2Q6P9P0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Slf2Q6P9P0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC23.11■■□□□ 1.29
Slf2Q6P9P0 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Slf2Q6P9P0 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Slf2Q6P9P0 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Slf2Q6P9P0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC23.1■■□□□ 1.29
Slf2Q6P9P0 Alkbh1-212ENSMUST00000185301 408 ntBASIC23.1■■□□□ 1.29
Slf2Q6P9P0 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Slf2Q6P9P0 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms