Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtl3Q6P1Y1 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtl3Q6P1Y1 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtl3Q6P1Y1 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtl3Q6P1Y1 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Rtl3Q6P1Y1 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.27■□□□□ 0.68
Rtl3Q6P1Y1 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtl3Q6P1Y1 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.27■□□□□ 0.68
Rtl3Q6P1Y1 Gm12441-201ENSMUST00000121806 588 ntBASIC19.27■□□□□ 0.68
Rtl3Q6P1Y1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.27■□□□□ 0.68
Rtl3Q6P1Y1 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.27■□□□□ 0.68
Rtl3Q6P1Y1 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.27■□□□□ 0.68
Rtl3Q6P1Y1 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtl3Q6P1Y1 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtl3Q6P1Y1 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtl3Q6P1Y1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtl3Q6P1Y1 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rtl3Q6P1Y1 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rtl3Q6P1Y1 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rtl3Q6P1Y1 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rtl3Q6P1Y1 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtl3Q6P1Y1 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtl3Q6P1Y1 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtl3Q6P1Y1 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtl3Q6P1Y1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtl3Q6P1Y1 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtl3Q6P1Y1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtl3Q6P1Y1 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtl3Q6P1Y1 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtl3Q6P1Y1 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtl3Q6P1Y1 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtl3Q6P1Y1 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtl3Q6P1Y1 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.26■□□□□ 0.67
Rtl3Q6P1Y1 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtl3Q6P1Y1 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtl3Q6P1Y1 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtl3Q6P1Y1 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.26■□□□□ 0.67
Rtl3Q6P1Y1 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rtl3Q6P1Y1 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtl3Q6P1Y1 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rtl3Q6P1Y1 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rtl3Q6P1Y1 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtl3Q6P1Y1 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtl3Q6P1Y1 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtl3Q6P1Y1 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.25■□□□□ 0.67
Rtl3Q6P1Y1 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.25■□□□□ 0.67
Rtl3Q6P1Y1 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtl3Q6P1Y1 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.24■□□□□ 0.67
Rtl3Q6P1Y1 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtl3Q6P1Y1 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rtl3Q6P1Y1 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtl3Q6P1Y1 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtl3Q6P1Y1 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.24■□□□□ 0.67
Rtl3Q6P1Y1 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rtl3Q6P1Y1 Mir5133-201ENSMUST00000174955 77 ntBASIC19.24■□□□□ 0.67
Rtl3Q6P1Y1 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.24■□□□□ 0.67
Rtl3Q6P1Y1 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtl3Q6P1Y1 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Rtl3Q6P1Y1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rtl3Q6P1Y1 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtl3Q6P1Y1 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtl3Q6P1Y1 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtl3Q6P1Y1 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rtl3Q6P1Y1 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtl3Q6P1Y1 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rtl3Q6P1Y1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtl3Q6P1Y1 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.23■□□□□ 0.67
Rtl3Q6P1Y1 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rtl3Q6P1Y1 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtl3Q6P1Y1 Gm6365-201ENSMUST00000054711 744 ntBASIC19.23■□□□□ 0.67
Rtl3Q6P1Y1 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtl3Q6P1Y1 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtl3Q6P1Y1 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Rtl3Q6P1Y1 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.23■□□□□ 0.67
Rtl3Q6P1Y1 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtl3Q6P1Y1 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtl3Q6P1Y1 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Rtl3Q6P1Y1 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Rtl3Q6P1Y1 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.22■□□□□ 0.67
Rtl3Q6P1Y1 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
Rtl3Q6P1Y1 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Rtl3Q6P1Y1 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Rtl3Q6P1Y1 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtl3Q6P1Y1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtl3Q6P1Y1 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtl3Q6P1Y1 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rtl3Q6P1Y1 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtl3Q6P1Y1 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtl3Q6P1Y1 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rtl3Q6P1Y1 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rtl3Q6P1Y1 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rtl3Q6P1Y1 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rtl3Q6P1Y1 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rtl3Q6P1Y1 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Rtl3Q6P1Y1 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.21■□□□□ 0.67
Rtl3Q6P1Y1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rtl3Q6P1Y1 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rtl3Q6P1Y1 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rtl3Q6P1Y1 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rtl3Q6P1Y1 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms