Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Tpm4Q6IRU2 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tpm4Q6IRU2 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tpm4Q6IRU2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tpm4Q6IRU2 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tpm4Q6IRU2 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tpm4Q6IRU2 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tpm4Q6IRU2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tpm4Q6IRU2 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tpm4Q6IRU2 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
Tpm4Q6IRU2 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Tpm4Q6IRU2 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tpm4Q6IRU2 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.84■□□□□ 0.93
Tpm4Q6IRU2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tpm4Q6IRU2 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Tpm4Q6IRU2 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Tpm4Q6IRU2 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tpm4Q6IRU2 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tpm4Q6IRU2 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Tpm4Q6IRU2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tpm4Q6IRU2 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.83■□□□□ 0.93
Tpm4Q6IRU2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tpm4Q6IRU2 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Tpm4Q6IRU2 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.83■□□□□ 0.93
Tpm4Q6IRU2 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Tpm4Q6IRU2 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Tpm4Q6IRU2 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Tpm4Q6IRU2 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.92
Tpm4Q6IRU2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tpm4Q6IRU2 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tpm4Q6IRU2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Tpm4Q6IRU2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tpm4Q6IRU2 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Tpm4Q6IRU2 Gm9954-202ENSMUST00000198686 4725 ntBASIC20.83■□□□□ 0.92
Tpm4Q6IRU2 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tpm4Q6IRU2 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Tpm4Q6IRU2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tpm4Q6IRU2 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.82■□□□□ 0.92
Tpm4Q6IRU2 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Tpm4Q6IRU2 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Tpm4Q6IRU2 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Tpm4Q6IRU2 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tpm4Q6IRU2 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tpm4Q6IRU2 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tpm4Q6IRU2 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tpm4Q6IRU2 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tpm4Q6IRU2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tpm4Q6IRU2 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tpm4Q6IRU2 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.81■□□□□ 0.92
Tpm4Q6IRU2 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tpm4Q6IRU2 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.81■□□□□ 0.92
Tpm4Q6IRU2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tpm4Q6IRU2 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
Tpm4Q6IRU2 BC021767-201ENSMUST00000126387 1716 ntBASIC20.81■□□□□ 0.92
Tpm4Q6IRU2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.81■□□□□ 0.92
Tpm4Q6IRU2 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.81■□□□□ 0.92
Tpm4Q6IRU2 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tpm4Q6IRU2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tpm4Q6IRU2 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Tpm4Q6IRU2 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Tpm4Q6IRU2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Tpm4Q6IRU2 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Tpm4Q6IRU2 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tpm4Q6IRU2 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tpm4Q6IRU2 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Tpm4Q6IRU2 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tpm4Q6IRU2 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.8■□□□□ 0.92
Tpm4Q6IRU2 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tpm4Q6IRU2 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tpm4Q6IRU2 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Tpm4Q6IRU2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tpm4Q6IRU2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tpm4Q6IRU2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tpm4Q6IRU2 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tpm4Q6IRU2 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Tpm4Q6IRU2 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tpm4Q6IRU2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tpm4Q6IRU2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tpm4Q6IRU2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.79■□□□□ 0.92
Tpm4Q6IRU2 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tpm4Q6IRU2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tpm4Q6IRU2 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Tpm4Q6IRU2 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tpm4Q6IRU2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tpm4Q6IRU2 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.79■□□□□ 0.92
Tpm4Q6IRU2 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Tpm4Q6IRU2 Gm13241-201ENSMUST00000094493 780 ntBASIC20.79■□□□□ 0.92
Tpm4Q6IRU2 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tpm4Q6IRU2 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tpm4Q6IRU2 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Tpm4Q6IRU2 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Tpm4Q6IRU2 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tpm4Q6IRU2 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
Tpm4Q6IRU2 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tpm4Q6IRU2 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tpm4Q6IRU2 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Tpm4Q6IRU2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tpm4Q6IRU2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.78■□□□□ 0.92
Tpm4Q6IRU2 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tpm4Q6IRU2 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms