Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sdc3Q64519 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Sdc3Q64519 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sdc3Q64519 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Sdc3Q64519 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sdc3Q64519 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sdc3Q64519 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sdc3Q64519 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sdc3Q64519 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sdc3Q64519 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sdc3Q64519 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sdc3Q64519 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
Sdc3Q64519 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sdc3Q64519 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.85■□□□□ 0.45
Sdc3Q64519 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.85■□□□□ 0.45
Sdc3Q64519 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sdc3Q64519 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sdc3Q64519 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Sdc3Q64519 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sdc3Q64519 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Sdc3Q64519 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Sdc3Q64519 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Sdc3Q64519 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sdc3Q64519 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sdc3Q64519 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.84■□□□□ 0.45
Sdc3Q64519 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Sdc3Q64519 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sdc3Q64519 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.84■□□□□ 0.45
Sdc3Q64519 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Sdc3Q64519 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sdc3Q64519 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.84■□□□□ 0.45
Sdc3Q64519 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.84■□□□□ 0.45
Sdc3Q64519 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.84■□□□□ 0.45
Sdc3Q64519 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sdc3Q64519 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sdc3Q64519 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sdc3Q64519 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sdc3Q64519 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Sdc3Q64519 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sdc3Q64519 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sdc3Q64519 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sdc3Q64519 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Sdc3Q64519 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sdc3Q64519 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Sdc3Q64519 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.83■□□□□ 0.44
Sdc3Q64519 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.83■□□□□ 0.44
Sdc3Q64519 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sdc3Q64519 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Sdc3Q64519 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Sdc3Q64519 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Sdc3Q64519 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sdc3Q64519 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sdc3Q64519 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sdc3Q64519 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sdc3Q64519 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sdc3Q64519 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sdc3Q64519 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sdc3Q64519 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.82■□□□□ 0.44
Sdc3Q64519 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sdc3Q64519 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sdc3Q64519 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sdc3Q64519 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sdc3Q64519 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sdc3Q64519 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sdc3Q64519 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sdc3Q64519 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Sdc3Q64519 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
Sdc3Q64519 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Sdc3Q64519 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sdc3Q64519 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Sdc3Q64519 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Sdc3Q64519 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sdc3Q64519 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sdc3Q64519 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sdc3Q64519 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sdc3Q64519 Gm13148-201ENSMUST00000118892 745 ntBASIC17.81■□□□□ 0.44
Sdc3Q64519 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sdc3Q64519 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sdc3Q64519 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.81■□□□□ 0.44
Sdc3Q64519 Gm27011-201ENSMUST00000182352 972 ntBASIC17.81■□□□□ 0.44
Sdc3Q64519 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.81■□□□□ 0.44
Sdc3Q64519 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sdc3Q64519 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sdc3Q64519 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Sdc3Q64519 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sdc3Q64519 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sdc3Q64519 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sdc3Q64519 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.8■□□□□ 0.44
Sdc3Q64519 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sdc3Q64519 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sdc3Q64519 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sdc3Q64519 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sdc3Q64519 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sdc3Q64519 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sdc3Q64519 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sdc3Q64519 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sdc3Q64519 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Sdc3Q64519 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.8■□□□□ 0.44
Sdc3Q64519 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sdc3Q64519 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms