Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Zfp248Q640N4 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Zfp248Q640N4 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Zfp248Q640N4 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Zfp248Q640N4 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC14.2□□□□□ -0.14
Zfp248Q640N4 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC14.2□□□□□ -0.14
Zfp248Q640N4 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Zfp248Q640N4 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Zfp248Q640N4 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Zfp248Q640N4 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Zfp248Q640N4 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Zfp248Q640N4 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Zfp248Q640N4 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Zfp248Q640N4 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Zfp248Q640N4 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Zfp248Q640N4 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Zfp248Q640N4 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Zfp248Q640N4 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Zfp248Q640N4 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Zfp248Q640N4 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Zfp248Q640N4 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Zfp248Q640N4 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Zfp248Q640N4 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Zfp248Q640N4 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Zfp248Q640N4 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Zfp248Q640N4 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Zfp248Q640N4 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Zfp248Q640N4 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Zfp248Q640N4 Gm9885-202ENSMUST00000186234 2209 ntBASIC14.19□□□□□ -0.14
Zfp248Q640N4 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Zfp248Q640N4 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Zfp248Q640N4 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Zfp248Q640N4 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Zfp248Q640N4 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Zfp248Q640N4 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Zfp248Q640N4 Gm26833-201ENSMUST00000180899 440 ntBASIC14.19□□□□□ -0.14
Zfp248Q640N4 Gm45417-201ENSMUST00000209533 758 ntBASIC14.19□□□□□ -0.14
Zfp248Q640N4 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Zfp248Q640N4 Gm6139-201ENSMUST00000079261 882 ntBASIC14.19□□□□□ -0.14
Zfp248Q640N4 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Zfp248Q640N4 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Zfp248Q640N4 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Zfp248Q640N4 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Zfp248Q640N4 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.19□□□□□ -0.14
Zfp248Q640N4 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Zfp248Q640N4 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Zfp248Q640N4 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC14.19□□□□□ -0.14
Zfp248Q640N4 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Zfp248Q640N4 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Zfp248Q640N4 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Zfp248Q640N4 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Zfp248Q640N4 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Zfp248Q640N4 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Zfp248Q640N4 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Zfp248Q640N4 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Zfp248Q640N4 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Zfp248Q640N4 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
Zfp248Q640N4 CT030146.1-201ENSMUST00000220919 217 ntBASIC14.18□□□□□ -0.14
Zfp248Q640N4 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Zfp248Q640N4 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Zfp248Q640N4 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Zfp248Q640N4 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Zfp248Q640N4 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Zfp248Q640N4 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Zfp248Q640N4 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Zfp248Q640N4 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Zfp248Q640N4 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Zfp248Q640N4 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Zfp248Q640N4 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Zfp248Q640N4 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Zfp248Q640N4 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Zfp248Q640N4 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Zfp248Q640N4 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Zfp248Q640N4 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Zfp248Q640N4 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC14.17□□□□□ -0.14
Zfp248Q640N4 Gm40848-201ENSMUST00000221998 324 ntBASIC14.17□□□□□ -0.14
Zfp248Q640N4 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC14.17□□□□□ -0.14
Zfp248Q640N4 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Zfp248Q640N4 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Zfp248Q640N4 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Zfp248Q640N4 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC14.17□□□□□ -0.14
Zfp248Q640N4 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Zfp248Q640N4 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Zfp248Q640N4 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Zfp248Q640N4 Gm38342-201ENSMUST00000195710 2980 ntBASIC14.16□□□□□ -0.14
Zfp248Q640N4 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Zfp248Q640N4 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Zfp248Q640N4 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Zfp248Q640N4 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Zfp248Q640N4 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
Zfp248Q640N4 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Zfp248Q640N4 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Zfp248Q640N4 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Zfp248Q640N4 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Zfp248Q640N4 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC14.16□□□□□ -0.14
Zfp248Q640N4 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Zfp248Q640N4 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Zfp248Q640N4 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Zfp248Q640N4 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Zfp248Q640N4 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms