Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col7a1Q63870 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Col7a1Q63870 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col7a1Q63870 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.7■□□□□ 0.1
Col7a1Q63870 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Col7a1Q63870 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col7a1Q63870 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC15.7■□□□□ 0.1
Col7a1Q63870 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col7a1Q63870 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col7a1Q63870 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Col7a1Q63870 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col7a1Q63870 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col7a1Q63870 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Col7a1Q63870 Gm6623-201ENSMUST00000173570 544 ntBASIC15.69■□□□□ 0.1
Col7a1Q63870 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.69■□□□□ 0.1
Col7a1Q63870 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.69■□□□□ 0.1
Col7a1Q63870 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col7a1Q63870 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col7a1Q63870 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col7a1Q63870 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Col7a1Q63870 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col7a1Q63870 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.69■□□□□ 0.1
Col7a1Q63870 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.69■□□□□ 0.1
Col7a1Q63870 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col7a1Q63870 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col7a1Q63870 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col7a1Q63870 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col7a1Q63870 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col7a1Q63870 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Col7a1Q63870 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Col7a1Q63870 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Col7a1Q63870 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col7a1Q63870 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col7a1Q63870 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.68■□□□□ 0.1
Col7a1Q63870 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Col7a1Q63870 AC154621.1-201ENSMUST00000226155 1119 ntBASIC15.68■□□□□ 0.1
Col7a1Q63870 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Col7a1Q63870 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col7a1Q63870 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC15.68■□□□□ 0.1
Col7a1Q63870 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col7a1Q63870 Gm7063-201ENSMUST00000186840 981 ntBASIC15.68■□□□□ 0.1
Col7a1Q63870 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Col7a1Q63870 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Col7a1Q63870 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Col7a1Q63870 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Col7a1Q63870 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC15.67■□□□□ 0.1
Col7a1Q63870 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col7a1Q63870 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Col7a1Q63870 Gm24589-201ENSMUST00000116692 94 ntBASIC15.67■□□□□ 0.1
Col7a1Q63870 Gm25016-201ENSMUST00000158399 131 ntBASIC15.67■□□□□ 0.1
Col7a1Q63870 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.67■□□□□ 0.1
Col7a1Q63870 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col7a1Q63870 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col7a1Q63870 Gm27525-201ENSMUST00000184465 107 ntBASIC15.67■□□□□ 0.1
Col7a1Q63870 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.67■□□□□ 0.1
Col7a1Q63870 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col7a1Q63870 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col7a1Q63870 Gm8587-201ENSMUST00000076538 843 ntBASIC15.66■□□□□ 0.1
Col7a1Q63870 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col7a1Q63870 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col7a1Q63870 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Col7a1Q63870 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col7a1Q63870 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col7a1Q63870 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col7a1Q63870 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col7a1Q63870 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col7a1Q63870 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col7a1Q63870 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col7a1Q63870 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col7a1Q63870 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col7a1Q63870 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col7a1Q63870 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col7a1Q63870 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.65■□□□□ 0.1
Col7a1Q63870 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Col7a1Q63870 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Col7a1Q63870 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Col7a1Q63870 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Col7a1Q63870 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.65■□□□□ 0.1
Col7a1Q63870 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.65■□□□□ 0.1
Col7a1Q63870 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col7a1Q63870 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col7a1Q63870 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col7a1Q63870 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col7a1Q63870 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col7a1Q63870 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col7a1Q63870 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col7a1Q63870 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.64■□□□□ 0.09
Col7a1Q63870 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col7a1Q63870 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col7a1Q63870 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col7a1Q63870 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col7a1Q63870 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col7a1Q63870 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.64■□□□□ 0.09
Col7a1Q63870 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.64■□□□□ 0.09
Col7a1Q63870 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.64■□□□□ 0.09
Col7a1Q63870 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.64■□□□□ 0.09
Col7a1Q63870 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Col7a1Q63870 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col7a1Q63870 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col7a1Q63870 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms