Protein–RNA interactions for Protein: Q62401

Ccl12, C-C motif chemokine 12, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl12Q62401 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccl12Q62401 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccl12Q62401 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccl12Q62401 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccl12Q62401 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccl12Q62401 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Ccl12Q62401 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccl12Q62401 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccl12Q62401 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccl12Q62401 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccl12Q62401 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Ccl12Q62401 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC14.88□□□□□ -0.03
Ccl12Q62401 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC14.88□□□□□ -0.03
Ccl12Q62401 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
Ccl12Q62401 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccl12Q62401 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccl12Q62401 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccl12Q62401 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Ccl12Q62401 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC14.88□□□□□ -0.03
Ccl12Q62401 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Ccl12Q62401 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccl12Q62401 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC14.88□□□□□ -0.03
Ccl12Q62401 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccl12Q62401 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Ccl12Q62401 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Ccl12Q62401 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl12Q62401 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl12Q62401 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl12Q62401 Gm35558-201ENSMUST00000222675 2219 ntBASIC14.87□□□□□ -0.03
Ccl12Q62401 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC14.87□□□□□ -0.03
Ccl12Q62401 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl12Q62401 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ccl12Q62401 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl12Q62401 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.87□□□□□ -0.03
Ccl12Q62401 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC14.87□□□□□ -0.03
Ccl12Q62401 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC14.87□□□□□ -0.03
Ccl12Q62401 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl12Q62401 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl12Q62401 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl12Q62401 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl12Q62401 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Ccl12Q62401 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl12Q62401 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl12Q62401 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl12Q62401 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl12Q62401 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl12Q62401 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl12Q62401 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl12Q62401 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
Ccl12Q62401 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl12Q62401 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl12Q62401 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl12Q62401 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Ccl12Q62401 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Ccl12Q62401 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl12Q62401 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl12Q62401 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl12Q62401 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ccl12Q62401 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl12Q62401 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl12Q62401 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl12Q62401 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.86□□□□□ -0.03
Ccl12Q62401 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl12Q62401 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl12Q62401 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl12Q62401 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC14.86□□□□□ -0.03
Ccl12Q62401 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl12Q62401 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC14.86□□□□□ -0.03
Ccl12Q62401 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Ccl12Q62401 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl12Q62401 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccl12Q62401 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccl12Q62401 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccl12Q62401 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccl12Q62401 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Ccl12Q62401 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC14.85□□□□□ -0.03
Ccl12Q62401 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccl12Q62401 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccl12Q62401 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccl12Q62401 Gm18688-201ENSMUST00000204695 1859 ntBASIC14.85□□□□□ -0.03
Ccl12Q62401 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccl12Q62401 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccl12Q62401 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccl12Q62401 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccl12Q62401 Gm42569-201ENSMUST00000200539 472 ntBASIC14.85□□□□□ -0.03
Ccl12Q62401 Gm10033-202ENSMUST00000211874 928 ntBASIC14.85□□□□□ -0.03
Ccl12Q62401 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccl12Q62401 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccl12Q62401 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.85□□□□□ -0.03
Ccl12Q62401 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccl12Q62401 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ccl12Q62401 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ccl12Q62401 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccl12Q62401 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccl12Q62401 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccl12Q62401 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccl12Q62401 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccl12Q62401 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
Ccl12Q62401 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccl12Q62401 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms