Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Gm12821-201ENSMUST00000120022 600 ntBASIC19.23■□□□□ 0.67
Six1Q62231 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.23■□□□□ 0.67
Six1Q62231 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Six1Q62231 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.23■□□□□ 0.67
Six1Q62231 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Six1Q62231 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Six1Q62231 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Six1Q62231 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Six1Q62231 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Six1Q62231 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.22■□□□□ 0.67
Six1Q62231 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Six1Q62231 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Six1Q62231 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Six1Q62231 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Six1Q62231 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Six1Q62231 Gm45417-201ENSMUST00000209533 758 ntBASIC19.22■□□□□ 0.67
Six1Q62231 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.22■□□□□ 0.67
Six1Q62231 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Six1Q62231 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Six1Q62231 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Six1Q62231 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Six1Q62231 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Six1Q62231 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Six1Q62231 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Six1Q62231 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Six1Q62231 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Six1Q62231 Gm26833-201ENSMUST00000180899 440 ntBASIC19.21■□□□□ 0.67
Six1Q62231 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.21■□□□□ 0.67
Six1Q62231 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.21■□□□□ 0.67
Six1Q62231 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.21■□□□□ 0.67
Six1Q62231 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Six1Q62231 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Six1Q62231 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Six1Q62231 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Six1Q62231 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.21■□□□□ 0.67
Six1Q62231 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Six1Q62231 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Six1Q62231 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Six1Q62231 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Six1Q62231 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Six1Q62231 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Six1Q62231 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Six1Q62231 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Six1Q62231 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Six1Q62231 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.2■□□□□ 0.66
Six1Q62231 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Six1Q62231 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Six1Q62231 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Six1Q62231 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Six1Q62231 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Six1Q62231 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Six1Q62231 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Six1Q62231 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Six1Q62231 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Six1Q62231 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Six1Q62231 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Six1Q62231 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Six1Q62231 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Six1Q62231 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Six1Q62231 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.19■□□□□ 0.66
Six1Q62231 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Six1Q62231 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Six1Q62231 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Six1Q62231 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Six1Q62231 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Six1Q62231 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Six1Q62231 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.18■□□□□ 0.66
Six1Q62231 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Six1Q62231 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Six1Q62231 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Six1Q62231 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Six1Q62231 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Six1Q62231 Gm43017-201ENSMUST00000198296 752 ntBASIC19.17■□□□□ 0.66
Six1Q62231 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Six1Q62231 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Six1Q62231 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Six1Q62231 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Six1Q62231 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Six1Q62231 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Six1Q62231 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Six1Q62231 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Six1Q62231 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.16■□□□□ 0.66
Six1Q62231 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Six1Q62231 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Six1Q62231 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Six1Q62231 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Six1Q62231 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Six1Q62231 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.16■□□□□ 0.66
Six1Q62231 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Six1Q62231 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Six1Q62231 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Six1Q62231 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Six1Q62231 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Six1Q62231 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Six1Q62231 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Six1Q62231 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.15■□□□□ 0.66
Six1Q62231 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.15■□□□□ 0.66
Six1Q62231 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.15■□□□□ 0.66
Six1Q62231 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Six1Q62231 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms