Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ift88Q61371 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ift88Q61371 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ift88Q61371 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Ift88Q61371 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.66■□□□□ 0.9
Ift88Q61371 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ift88Q61371 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
Ift88Q61371 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ift88Q61371 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Ift88Q61371 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ift88Q61371 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ift88Q61371 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ift88Q61371 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ift88Q61371 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ift88Q61371 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ift88Q61371 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ift88Q61371 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Ift88Q61371 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.65■□□□□ 0.9
Ift88Q61371 Gm27801-201ENSMUST00000184174 223 ntBASIC20.65■□□□□ 0.9
Ift88Q61371 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.65■□□□□ 0.9
Ift88Q61371 Gm13241-201ENSMUST00000094493 780 ntBASIC20.65■□□□□ 0.9
Ift88Q61371 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Ift88Q61371 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ift88Q61371 Rarb-207ENSMUST00000225921 2756 ntBASIC20.64■□□□□ 0.9
Ift88Q61371 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ift88Q61371 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ift88Q61371 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ift88Q61371 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ift88Q61371 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ift88Q61371 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.63■□□□□ 0.89
Ift88Q61371 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ift88Q61371 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ift88Q61371 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ift88Q61371 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ift88Q61371 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ift88Q61371 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ift88Q61371 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ift88Q61371 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Ift88Q61371 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ift88Q61371 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ift88Q61371 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.63■□□□□ 0.89
Ift88Q61371 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.63■□□□□ 0.89
Ift88Q61371 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ift88Q61371 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.63■□□□□ 0.89
Ift88Q61371 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ift88Q61371 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ift88Q61371 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
Ift88Q61371 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ift88Q61371 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ift88Q61371 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ift88Q61371 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Ift88Q61371 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ift88Q61371 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ift88Q61371 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ift88Q61371 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ift88Q61371 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Ift88Q61371 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ift88Q61371 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ift88Q61371 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ift88Q61371 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ift88Q61371 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ift88Q61371 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ift88Q61371 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ift88Q61371 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ift88Q61371 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.61■□□□□ 0.89
Ift88Q61371 Gm43173-201ENSMUST00000202246 593 ntBASIC20.61■□□□□ 0.89
Ift88Q61371 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.61■□□□□ 0.89
Ift88Q61371 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ift88Q61371 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.61■□□□□ 0.89
Ift88Q61371 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.61■□□□□ 0.89
Ift88Q61371 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.61■□□□□ 0.89
Ift88Q61371 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ift88Q61371 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ift88Q61371 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ift88Q61371 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ift88Q61371 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ift88Q61371 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ift88Q61371 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ift88Q61371 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ift88Q61371 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ift88Q61371 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ift88Q61371 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ift88Q61371 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ift88Q61371 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ift88Q61371 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.59■□□□□ 0.89
Ift88Q61371 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ift88Q61371 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
Ift88Q61371 Gm8493-201ENSMUST00000196881 489 ntBASIC20.59■□□□□ 0.89
Ift88Q61371 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
Ift88Q61371 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Ift88Q61371 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ift88Q61371 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ift88Q61371 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ift88Q61371 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ift88Q61371 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ift88Q61371 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ift88Q61371 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Ift88Q61371 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Ift88Q61371 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.58■□□□□ 0.89
Ift88Q61371 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms