Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav7d-4Q5R1H9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav7d-4Q5R1H9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav7d-4Q5R1H9 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav7d-4Q5R1H9 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav7d-4Q5R1H9 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav7d-4Q5R1H9 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav7d-4Q5R1H9 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav7d-4Q5R1H9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav7d-4Q5R1H9 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav7d-4Q5R1H9 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Trav7d-4Q5R1H9 AC154266.1-201ENSMUST00000223190 503 ntBASIC14.27□□□□□ -0.13
Trav7d-4Q5R1H9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.27□□□□□ -0.13
Trav7d-4Q5R1H9 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.27□□□□□ -0.13
Trav7d-4Q5R1H9 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav7d-4Q5R1H9 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav7d-4Q5R1H9 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Trav7d-4Q5R1H9 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav7d-4Q5R1H9 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav7d-4Q5R1H9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav7d-4Q5R1H9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav7d-4Q5R1H9 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav7d-4Q5R1H9 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.26□□□□□ -0.13
Trav7d-4Q5R1H9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav7d-4Q5R1H9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav7d-4Q5R1H9 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.26□□□□□ -0.13
Trav7d-4Q5R1H9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav7d-4Q5R1H9 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav7d-4Q5R1H9 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Trav7d-4Q5R1H9 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav7d-4Q5R1H9 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav7d-4Q5R1H9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav7d-4Q5R1H9 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav7d-4Q5R1H9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav7d-4Q5R1H9 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trav7d-4Q5R1H9 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Trav7d-4Q5R1H9 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav7d-4Q5R1H9 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav7d-4Q5R1H9 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav7d-4Q5R1H9 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav7d-4Q5R1H9 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav7d-4Q5R1H9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav7d-4Q5R1H9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav7d-4Q5R1H9 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav7d-4Q5R1H9 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav7d-4Q5R1H9 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Trav7d-4Q5R1H9 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav7d-4Q5R1H9 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav7d-4Q5R1H9 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Trav7d-4Q5R1H9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav7d-4Q5R1H9 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav7d-4Q5R1H9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav7d-4Q5R1H9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav7d-4Q5R1H9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav7d-4Q5R1H9 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav7d-4Q5R1H9 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav7d-4Q5R1H9 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav7d-4Q5R1H9 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav7d-4Q5R1H9 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav7d-4Q5R1H9 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav7d-4Q5R1H9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav7d-4Q5R1H9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav7d-4Q5R1H9 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav7d-4Q5R1H9 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav7d-4Q5R1H9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav7d-4Q5R1H9 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Trav7d-4Q5R1H9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav7d-4Q5R1H9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav7d-4Q5R1H9 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav7d-4Q5R1H9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav7d-4Q5R1H9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav7d-4Q5R1H9 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
Trav7d-4Q5R1H9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trav7d-4Q5R1H9 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.23□□□□□ -0.13
Trav7d-4Q5R1H9 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav7d-4Q5R1H9 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC14.23□□□□□ -0.13
Trav7d-4Q5R1H9 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav7d-4Q5R1H9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.23□□□□□ -0.13
Trav7d-4Q5R1H9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav7d-4Q5R1H9 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav7d-4Q5R1H9 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav7d-4Q5R1H9 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav7d-4Q5R1H9 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav7d-4Q5R1H9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trav7d-4Q5R1H9 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav7d-4Q5R1H9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav7d-4Q5R1H9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC14.22□□□□□ -0.13
Trav7d-4Q5R1H9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC14.22□□□□□ -0.13
Trav7d-4Q5R1H9 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC14.22□□□□□ -0.13
Trav7d-4Q5R1H9 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav7d-4Q5R1H9 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav7d-4Q5R1H9 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav7d-4Q5R1H9 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Trav7d-4Q5R1H9 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav7d-4Q5R1H9 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav7d-4Q5R1H9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav7d-4Q5R1H9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav7d-4Q5R1H9 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav7d-4Q5R1H9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav7d-4Q5R1H9 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms