Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.54□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC14.53□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC14.53□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav15-1-dv6-1Q5R1D2 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.52□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.52□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC14.5□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Gm42501-201ENSMUST00000200220 1026 ntBASIC14.5□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.5□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC14.49□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav15-1-dv6-1Q5R1D2 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms