Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rnf20Q5DTM8 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rnf20Q5DTM8 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC22.25■■□□□ 1.15
Rnf20Q5DTM8 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rnf20Q5DTM8 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rnf20Q5DTM8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rnf20Q5DTM8 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rnf20Q5DTM8 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rnf20Q5DTM8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Rnf20Q5DTM8 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rnf20Q5DTM8 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rnf20Q5DTM8 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rnf20Q5DTM8 Gm13234-201ENSMUST00000120010 747 ntBASIC22.25■■□□□ 1.15
Rnf20Q5DTM8 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Rnf20Q5DTM8 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Rnf20Q5DTM8 Gm5112-201ENSMUST00000204407 2368 ntBASIC22.25■■□□□ 1.15
Rnf20Q5DTM8 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rnf20Q5DTM8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rnf20Q5DTM8 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Rnf20Q5DTM8 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rnf20Q5DTM8 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC22.24■■□□□ 1.15
Rnf20Q5DTM8 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rnf20Q5DTM8 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rnf20Q5DTM8 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rnf20Q5DTM8 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
Rnf20Q5DTM8 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Rnf20Q5DTM8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rnf20Q5DTM8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rnf20Q5DTM8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rnf20Q5DTM8 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rnf20Q5DTM8 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rnf20Q5DTM8 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rnf20Q5DTM8 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rnf20Q5DTM8 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Rnf20Q5DTM8 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Rnf20Q5DTM8 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rnf20Q5DTM8 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rnf20Q5DTM8 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Rnf20Q5DTM8 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rnf20Q5DTM8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rnf20Q5DTM8 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rnf20Q5DTM8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Rnf20Q5DTM8 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rnf20Q5DTM8 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Rnf20Q5DTM8 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC22.23■■□□□ 1.15
Rnf20Q5DTM8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rnf20Q5DTM8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rnf20Q5DTM8 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rnf20Q5DTM8 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rnf20Q5DTM8 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC22.22■■□□□ 1.15
Rnf20Q5DTM8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rnf20Q5DTM8 Gm42778-201ENSMUST00000199644 553 ntBASIC22.22■■□□□ 1.15
Rnf20Q5DTM8 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rnf20Q5DTM8 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Rnf20Q5DTM8 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rnf20Q5DTM8 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rnf20Q5DTM8 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rnf20Q5DTM8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Rnf20Q5DTM8 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rnf20Q5DTM8 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rnf20Q5DTM8 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Rnf20Q5DTM8 AC099934.2-201ENSMUST00000196389 70 ntBASIC22.21■■□□□ 1.15
Rnf20Q5DTM8 AC156953.1-201ENSMUST00000196953 70 ntBASIC22.21■■□□□ 1.15
Rnf20Q5DTM8 AC157822.2-201ENSMUST00000200291 70 ntBASIC22.21■■□□□ 1.15
Rnf20Q5DTM8 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Rnf20Q5DTM8 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Rnf20Q5DTM8 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Rnf20Q5DTM8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC22.2■■□□□ 1.14
Rnf20Q5DTM8 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Rnf20Q5DTM8 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC22.2■■□□□ 1.14
Rnf20Q5DTM8 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Rnf20Q5DTM8 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC22.2■■□□□ 1.14
Rnf20Q5DTM8 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rnf20Q5DTM8 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC22.2■■□□□ 1.14
Rnf20Q5DTM8 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rnf20Q5DTM8 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Rnf20Q5DTM8 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rnf20Q5DTM8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rnf20Q5DTM8 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC22.2■■□□□ 1.14
Rnf20Q5DTM8 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rnf20Q5DTM8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rnf20Q5DTM8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rnf20Q5DTM8 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Rnf20Q5DTM8 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Rnf20Q5DTM8 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rnf20Q5DTM8 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rnf20Q5DTM8 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
Rnf20Q5DTM8 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Rnf20Q5DTM8 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rnf20Q5DTM8 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC22.19■■□□□ 1.14
Rnf20Q5DTM8 Gm7856-201ENSMUST00000117514 1493 ntBASIC22.19■■□□□ 1.14
Rnf20Q5DTM8 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rnf20Q5DTM8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC22.18■■□□□ 1.14
Rnf20Q5DTM8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rnf20Q5DTM8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rnf20Q5DTM8 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rnf20Q5DTM8 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rnf20Q5DTM8 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rnf20Q5DTM8 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Rnf20Q5DTM8 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms