Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
R3hdm4Q4VBF2 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.2■□□□□ 0.82
R3hdm4Q4VBF2 Gm6365-201ENSMUST00000054711 744 ntBASIC20.2■□□□□ 0.82
R3hdm4Q4VBF2 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
R3hdm4Q4VBF2 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
R3hdm4Q4VBF2 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.2■□□□□ 0.82
R3hdm4Q4VBF2 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
R3hdm4Q4VBF2 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
R3hdm4Q4VBF2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
R3hdm4Q4VBF2 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
R3hdm4Q4VBF2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
R3hdm4Q4VBF2 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
R3hdm4Q4VBF2 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
R3hdm4Q4VBF2 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
R3hdm4Q4VBF2 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
R3hdm4Q4VBF2 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
R3hdm4Q4VBF2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
R3hdm4Q4VBF2 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
R3hdm4Q4VBF2 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
R3hdm4Q4VBF2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
R3hdm4Q4VBF2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
R3hdm4Q4VBF2 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
R3hdm4Q4VBF2 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
R3hdm4Q4VBF2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
R3hdm4Q4VBF2 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
R3hdm4Q4VBF2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
R3hdm4Q4VBF2 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.18■□□□□ 0.82
R3hdm4Q4VBF2 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
R3hdm4Q4VBF2 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
R3hdm4Q4VBF2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
R3hdm4Q4VBF2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
R3hdm4Q4VBF2 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
R3hdm4Q4VBF2 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
R3hdm4Q4VBF2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
R3hdm4Q4VBF2 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
R3hdm4Q4VBF2 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
R3hdm4Q4VBF2 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
R3hdm4Q4VBF2 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
R3hdm4Q4VBF2 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.17■□□□□ 0.82
R3hdm4Q4VBF2 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
R3hdm4Q4VBF2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.17■□□□□ 0.82
R3hdm4Q4VBF2 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.17■□□□□ 0.82
R3hdm4Q4VBF2 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
R3hdm4Q4VBF2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.17■□□□□ 0.82
R3hdm4Q4VBF2 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
R3hdm4Q4VBF2 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
R3hdm4Q4VBF2 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.17■□□□□ 0.82
R3hdm4Q4VBF2 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
R3hdm4Q4VBF2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
R3hdm4Q4VBF2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
R3hdm4Q4VBF2 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
R3hdm4Q4VBF2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.16■□□□□ 0.82
R3hdm4Q4VBF2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
R3hdm4Q4VBF2 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
R3hdm4Q4VBF2 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
R3hdm4Q4VBF2 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
R3hdm4Q4VBF2 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
R3hdm4Q4VBF2 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
R3hdm4Q4VBF2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
R3hdm4Q4VBF2 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
R3hdm4Q4VBF2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
R3hdm4Q4VBF2 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
R3hdm4Q4VBF2 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
R3hdm4Q4VBF2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
R3hdm4Q4VBF2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
R3hdm4Q4VBF2 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
R3hdm4Q4VBF2 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
R3hdm4Q4VBF2 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.15■□□□□ 0.82
R3hdm4Q4VBF2 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
R3hdm4Q4VBF2 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
R3hdm4Q4VBF2 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.15■□□□□ 0.82
R3hdm4Q4VBF2 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.15■□□□□ 0.82
R3hdm4Q4VBF2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
R3hdm4Q4VBF2 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
R3hdm4Q4VBF2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
R3hdm4Q4VBF2 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
R3hdm4Q4VBF2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
R3hdm4Q4VBF2 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
R3hdm4Q4VBF2 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
R3hdm4Q4VBF2 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
R3hdm4Q4VBF2 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
R3hdm4Q4VBF2 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
R3hdm4Q4VBF2 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
R3hdm4Q4VBF2 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
R3hdm4Q4VBF2 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
R3hdm4Q4VBF2 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
R3hdm4Q4VBF2 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
R3hdm4Q4VBF2 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
R3hdm4Q4VBF2 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
R3hdm4Q4VBF2 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
R3hdm4Q4VBF2 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
R3hdm4Q4VBF2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
R3hdm4Q4VBF2 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
R3hdm4Q4VBF2 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
R3hdm4Q4VBF2 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
R3hdm4Q4VBF2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
R3hdm4Q4VBF2 Gm13148-201ENSMUST00000118892 745 ntBASIC20.13■□□□□ 0.81
R3hdm4Q4VBF2 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
R3hdm4Q4VBF2 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
R3hdm4Q4VBF2 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms