Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Syne3Q4FZC9 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Syne3Q4FZC9 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Syne3Q4FZC9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Syne3Q4FZC9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Syne3Q4FZC9 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Syne3Q4FZC9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.78■□□□□ 0.76
Syne3Q4FZC9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Syne3Q4FZC9 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Syne3Q4FZC9 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.77■□□□□ 0.76
Syne3Q4FZC9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Syne3Q4FZC9 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
Syne3Q4FZC9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Syne3Q4FZC9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Syne3Q4FZC9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Syne3Q4FZC9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Syne3Q4FZC9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Syne3Q4FZC9 Gm18671-201ENSMUST00000214826 683 ntBASIC19.77■□□□□ 0.76
Syne3Q4FZC9 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Syne3Q4FZC9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Syne3Q4FZC9 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Syne3Q4FZC9 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.77■□□□□ 0.76
Syne3Q4FZC9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.77■□□□□ 0.76
Syne3Q4FZC9 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Syne3Q4FZC9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Syne3Q4FZC9 Reep4-203ENSMUST00000226563 1444 ntBASIC19.76■□□□□ 0.75
Syne3Q4FZC9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Syne3Q4FZC9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Syne3Q4FZC9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Syne3Q4FZC9 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Syne3Q4FZC9 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.76■□□□□ 0.75
Syne3Q4FZC9 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.76■□□□□ 0.75
Syne3Q4FZC9 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Syne3Q4FZC9 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Syne3Q4FZC9 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Syne3Q4FZC9 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Syne3Q4FZC9 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Syne3Q4FZC9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Syne3Q4FZC9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Syne3Q4FZC9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.76■□□□□ 0.75
Syne3Q4FZC9 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Syne3Q4FZC9 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Syne3Q4FZC9 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
Syne3Q4FZC9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Syne3Q4FZC9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Syne3Q4FZC9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Syne3Q4FZC9 Gm13234-201ENSMUST00000120010 747 ntBASIC19.75■□□□□ 0.75
Syne3Q4FZC9 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Syne3Q4FZC9 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.75■□□□□ 0.75
Syne3Q4FZC9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Syne3Q4FZC9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Syne3Q4FZC9 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Syne3Q4FZC9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.75■□□□□ 0.75
Syne3Q4FZC9 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Syne3Q4FZC9 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Syne3Q4FZC9 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Syne3Q4FZC9 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Syne3Q4FZC9 Gm7860-201ENSMUST00000121190 879 ntBASIC19.74■□□□□ 0.75
Syne3Q4FZC9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.74■□□□□ 0.75
Syne3Q4FZC9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Syne3Q4FZC9 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Syne3Q4FZC9 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Syne3Q4FZC9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Syne3Q4FZC9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Syne3Q4FZC9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Syne3Q4FZC9 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Syne3Q4FZC9 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.74■□□□□ 0.75
Syne3Q4FZC9 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Syne3Q4FZC9 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.74■□□□□ 0.75
Syne3Q4FZC9 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Syne3Q4FZC9 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.73■□□□□ 0.75
Syne3Q4FZC9 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Syne3Q4FZC9 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.73■□□□□ 0.75
Syne3Q4FZC9 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Syne3Q4FZC9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Syne3Q4FZC9 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Syne3Q4FZC9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Syne3Q4FZC9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Syne3Q4FZC9 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Syne3Q4FZC9 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Syne3Q4FZC9 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Syne3Q4FZC9 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Syne3Q4FZC9 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.72■□□□□ 0.75
Syne3Q4FZC9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.72■□□□□ 0.75
Syne3Q4FZC9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Syne3Q4FZC9 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Syne3Q4FZC9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.72■□□□□ 0.75
Syne3Q4FZC9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.72■□□□□ 0.75
Syne3Q4FZC9 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Syne3Q4FZC9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Syne3Q4FZC9 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Syne3Q4FZC9 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Syne3Q4FZC9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Syne3Q4FZC9 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Syne3Q4FZC9 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Syne3Q4FZC9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Syne3Q4FZC9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Syne3Q4FZC9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Syne3Q4FZC9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Syne3Q4FZC9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms