Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.83■□□□□ 0.61
Fam196aQ3USH1 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Fam196aQ3USH1 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Fam196aQ3USH1 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Fam196aQ3USH1 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Fam196aQ3USH1 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.83■□□□□ 0.6
Fam196aQ3USH1 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Fam196aQ3USH1 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Fam196aQ3USH1 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.83■□□□□ 0.6
Fam196aQ3USH1 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Fam196aQ3USH1 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.83■□□□□ 0.6
Fam196aQ3USH1 Timm23-208ENSMUST00000226683 750 ntBASIC18.83■□□□□ 0.6
Fam196aQ3USH1 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Fam196aQ3USH1 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Fam196aQ3USH1 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Fam196aQ3USH1 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Fam196aQ3USH1 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Fam196aQ3USH1 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Fam196aQ3USH1 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Fam196aQ3USH1 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Fam196aQ3USH1 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Fam196aQ3USH1 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fam196aQ3USH1 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Fam196aQ3USH1 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.82■□□□□ 0.6
Fam196aQ3USH1 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fam196aQ3USH1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.82■□□□□ 0.6
Fam196aQ3USH1 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.82■□□□□ 0.6
Fam196aQ3USH1 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Fam196aQ3USH1 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.82■□□□□ 0.6
Fam196aQ3USH1 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fam196aQ3USH1 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fam196aQ3USH1 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fam196aQ3USH1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Fam196aQ3USH1 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Fam196aQ3USH1 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.81■□□□□ 0.6
Fam196aQ3USH1 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fam196aQ3USH1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Fam196aQ3USH1 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fam196aQ3USH1 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fam196aQ3USH1 Gm3375-201ENSMUST00000203929 796 ntBASIC18.81■□□□□ 0.6
Fam196aQ3USH1 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fam196aQ3USH1 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fam196aQ3USH1 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Fam196aQ3USH1 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fam196aQ3USH1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Fam196aQ3USH1 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Fam196aQ3USH1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Fam196aQ3USH1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Fam196aQ3USH1 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Fam196aQ3USH1 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fam196aQ3USH1 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.8■□□□□ 0.6
Fam196aQ3USH1 Gm14859-201ENSMUST00000117752 357 ntBASIC18.8■□□□□ 0.6
Fam196aQ3USH1 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Fam196aQ3USH1 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Fam196aQ3USH1 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fam196aQ3USH1 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fam196aQ3USH1 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fam196aQ3USH1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fam196aQ3USH1 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fam196aQ3USH1 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Fam196aQ3USH1 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.79■□□□□ 0.6
Fam196aQ3USH1 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Fam196aQ3USH1 Gm18959-201ENSMUST00000208954 655 ntBASIC18.79■□□□□ 0.6
Fam196aQ3USH1 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.79■□□□□ 0.6
Fam196aQ3USH1 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.79■□□□□ 0.6
Fam196aQ3USH1 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Fam196aQ3USH1 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Fam196aQ3USH1 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Fam196aQ3USH1 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Fam196aQ3USH1 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Fam196aQ3USH1 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Fam196aQ3USH1 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Fam196aQ3USH1 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Fam196aQ3USH1 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Fam196aQ3USH1 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Fam196aQ3USH1 Ank2-226ENSMUST00000189368 339 ntBASIC18.78■□□□□ 0.6
Fam196aQ3USH1 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.78■□□□□ 0.6
Fam196aQ3USH1 Mtag2-201ENSMUST00000058665 714 ntBASIC18.78■□□□□ 0.6
Fam196aQ3USH1 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Fam196aQ3USH1 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Fam196aQ3USH1 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Fam196aQ3USH1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Fam196aQ3USH1 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Fam196aQ3USH1 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Fam196aQ3USH1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Fam196aQ3USH1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Fam196aQ3USH1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Fam196aQ3USH1 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Fam196aQ3USH1 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Fam196aQ3USH1 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.77■□□□□ 0.6
Fam196aQ3USH1 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Fam196aQ3USH1 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Fam196aQ3USH1 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Fam196aQ3USH1 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.77■□□□□ 0.59
Fam196aQ3USH1 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.76■□□□□ 0.59
Fam196aQ3USH1 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Fam196aQ3USH1 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Fam196aQ3USH1 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Fam196aQ3USH1 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Fam196aQ3USH1 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms