Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Arhgef40Q3UPH7 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Arhgef40Q3UPH7 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Arhgef40Q3UPH7 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC27.79■■■□□ 2.04
Arhgef40Q3UPH7 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Arhgef40Q3UPH7 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Arhgef40Q3UPH7 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Arhgef40Q3UPH7 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC27.79■■■□□ 2.04
Arhgef40Q3UPH7 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Arhgef40Q3UPH7 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Arhgef40Q3UPH7 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Arhgef40Q3UPH7 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Arhgef40Q3UPH7 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC27.78■■■□□ 2.04
Arhgef40Q3UPH7 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC27.78■■■□□ 2.04
Arhgef40Q3UPH7 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Arhgef40Q3UPH7 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC27.78■■■□□ 2.04
Arhgef40Q3UPH7 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Arhgef40Q3UPH7 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Arhgef40Q3UPH7 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Arhgef40Q3UPH7 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC27.78■■■□□ 2.04
Arhgef40Q3UPH7 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC27.77■■■□□ 2.04
Arhgef40Q3UPH7 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Arhgef40Q3UPH7 Gm6277-202ENSMUST00000224036 2779 ntBASIC27.77■■■□□ 2.04
Arhgef40Q3UPH7 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC27.77■■■□□ 2.04
Arhgef40Q3UPH7 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Arhgef40Q3UPH7 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Arhgef40Q3UPH7 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC27.77■■■□□ 2.04
Arhgef40Q3UPH7 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Arhgef40Q3UPH7 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
Arhgef40Q3UPH7 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Arhgef40Q3UPH7 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC27.76■■■□□ 2.03
Arhgef40Q3UPH7 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC27.76■■■□□ 2.03
Arhgef40Q3UPH7 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC27.76■■■□□ 2.03
Arhgef40Q3UPH7 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC27.76■■■□□ 2.03
Arhgef40Q3UPH7 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC27.76■■■□□ 2.03
Arhgef40Q3UPH7 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Arhgef40Q3UPH7 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Arhgef40Q3UPH7 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC27.75■■■□□ 2.03
Arhgef40Q3UPH7 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Arhgef40Q3UPH7 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC27.75■■■□□ 2.03
Arhgef40Q3UPH7 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC27.75■■■□□ 2.03
Arhgef40Q3UPH7 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Arhgef40Q3UPH7 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Arhgef40Q3UPH7 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Arhgef40Q3UPH7 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Arhgef40Q3UPH7 Gm20472-201ENSMUST00000174403 1240 ntBASIC27.74■■■□□ 2.03
Arhgef40Q3UPH7 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC27.74■■■□□ 2.03
Arhgef40Q3UPH7 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Arhgef40Q3UPH7 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC27.74■■■□□ 2.03
Arhgef40Q3UPH7 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Arhgef40Q3UPH7 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC27.74■■■□□ 2.03
Arhgef40Q3UPH7 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC27.74■■■□□ 2.03
Arhgef40Q3UPH7 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Arhgef40Q3UPH7 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC27.73■■■□□ 2.03
Arhgef40Q3UPH7 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
Arhgef40Q3UPH7 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
Arhgef40Q3UPH7 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Arhgef40Q3UPH7 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Arhgef40Q3UPH7 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Arhgef40Q3UPH7 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC27.72■■■□□ 2.03
Arhgef40Q3UPH7 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC27.72■■■□□ 2.03
Arhgef40Q3UPH7 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC27.72■■■□□ 2.03
Arhgef40Q3UPH7 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
Arhgef40Q3UPH7 Mtag2-201ENSMUST00000058665 714 ntBASIC27.72■■■□□ 2.03
Arhgef40Q3UPH7 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC27.72■■■□□ 2.03
Arhgef40Q3UPH7 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC27.72■■■□□ 2.03
Arhgef40Q3UPH7 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC27.72■■■□□ 2.03
Arhgef40Q3UPH7 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Arhgef40Q3UPH7 Flg-201ENSMUST00000050758 1488 ntBASIC27.72■■■□□ 2.03
Arhgef40Q3UPH7 Gm9987-201ENSMUST00000069768 567 ntBASIC27.72■■■□□ 2.03
Arhgef40Q3UPH7 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Arhgef40Q3UPH7 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC27.71■■■□□ 2.03
Arhgef40Q3UPH7 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Arhgef40Q3UPH7 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Arhgef40Q3UPH7 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC27.71■■■□□ 2.03
Arhgef40Q3UPH7 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Arhgef40Q3UPH7 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC27.71■■■□□ 2.03
Arhgef40Q3UPH7 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC27.7■■■□□ 2.03
Arhgef40Q3UPH7 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
Arhgef40Q3UPH7 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
Arhgef40Q3UPH7 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC27.7■■■□□ 2.02
Arhgef40Q3UPH7 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC27.7■■■□□ 2.02
Arhgef40Q3UPH7 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC27.7■■■□□ 2.02
Arhgef40Q3UPH7 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC27.7■■■□□ 2.02
Arhgef40Q3UPH7 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC27.7■■■□□ 2.02
Arhgef40Q3UPH7 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC27.7■■■□□ 2.02
Arhgef40Q3UPH7 AC124603.1-201ENSMUST00000223843 308 ntBASIC27.7■■■□□ 2.02
Arhgef40Q3UPH7 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC27.7■■■□□ 2.02
Arhgef40Q3UPH7 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
Arhgef40Q3UPH7 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Arhgef40Q3UPH7 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Arhgef40Q3UPH7 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Arhgef40Q3UPH7 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC27.69■■■□□ 2.02
Arhgef40Q3UPH7 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Arhgef40Q3UPH7 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC27.69■■■□□ 2.02
Arhgef40Q3UPH7 Gm10231-201ENSMUST00000181584 441 ntBASIC27.69■■■□□ 2.02
Arhgef40Q3UPH7 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Arhgef40Q3UPH7 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Arhgef40Q3UPH7 Gm10175-202ENSMUST00000208752 441 ntBASIC27.69■■■□□ 2.02
Arhgef40Q3UPH7 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms