Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Smcr8Q3UMB5 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smcr8Q3UMB5 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.03■□□□□ 0.8
Smcr8Q3UMB5 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smcr8Q3UMB5 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.03■□□□□ 0.8
Smcr8Q3UMB5 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Smcr8Q3UMB5 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Smcr8Q3UMB5 Rab3c-203ENSMUST00000224180 967 ntBASIC20.03■□□□□ 0.8
Smcr8Q3UMB5 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smcr8Q3UMB5 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Smcr8Q3UMB5 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Smcr8Q3UMB5 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Smcr8Q3UMB5 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Smcr8Q3UMB5 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smcr8Q3UMB5 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smcr8Q3UMB5 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smcr8Q3UMB5 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smcr8Q3UMB5 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smcr8Q3UMB5 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smcr8Q3UMB5 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smcr8Q3UMB5 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smcr8Q3UMB5 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smcr8Q3UMB5 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Smcr8Q3UMB5 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.02■□□□□ 0.8
Smcr8Q3UMB5 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smcr8Q3UMB5 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smcr8Q3UMB5 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smcr8Q3UMB5 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smcr8Q3UMB5 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.02■□□□□ 0.79
Smcr8Q3UMB5 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smcr8Q3UMB5 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smcr8Q3UMB5 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smcr8Q3UMB5 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smcr8Q3UMB5 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smcr8Q3UMB5 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smcr8Q3UMB5 Gm22240-201ENSMUST00000175225 82 ntBASIC20.01■□□□□ 0.79
Smcr8Q3UMB5 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.01■□□□□ 0.79
Smcr8Q3UMB5 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smcr8Q3UMB5 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smcr8Q3UMB5 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smcr8Q3UMB5 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smcr8Q3UMB5 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.01■□□□□ 0.79
Smcr8Q3UMB5 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Smcr8Q3UMB5 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smcr8Q3UMB5 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smcr8Q3UMB5 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smcr8Q3UMB5 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Smcr8Q3UMB5 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smcr8Q3UMB5 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20■□□□□ 0.79
Smcr8Q3UMB5 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Smcr8Q3UMB5 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20■□□□□ 0.79
Smcr8Q3UMB5 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20■□□□□ 0.79
Smcr8Q3UMB5 AC135637.1-201ENSMUST00000227750 365 ntBASIC20■□□□□ 0.79
Smcr8Q3UMB5 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Smcr8Q3UMB5 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20■□□□□ 0.79
Smcr8Q3UMB5 Gm45640-201ENSMUST00000210665 1896 ntBASIC20■□□□□ 0.79
Smcr8Q3UMB5 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Smcr8Q3UMB5 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smcr8Q3UMB5 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smcr8Q3UMB5 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20■□□□□ 0.79
Smcr8Q3UMB5 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smcr8Q3UMB5 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Smcr8Q3UMB5 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smcr8Q3UMB5 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smcr8Q3UMB5 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.99■□□□□ 0.79
Smcr8Q3UMB5 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Smcr8Q3UMB5 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.99■□□□□ 0.79
Smcr8Q3UMB5 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smcr8Q3UMB5 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Smcr8Q3UMB5 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smcr8Q3UMB5 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smcr8Q3UMB5 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smcr8Q3UMB5 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smcr8Q3UMB5 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.99■□□□□ 0.79
Smcr8Q3UMB5 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smcr8Q3UMB5 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smcr8Q3UMB5 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smcr8Q3UMB5 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Smcr8Q3UMB5 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smcr8Q3UMB5 Gm8520-201ENSMUST00000186517 868 ntBASIC19.98■□□□□ 0.79
Smcr8Q3UMB5 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
Smcr8Q3UMB5 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smcr8Q3UMB5 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smcr8Q3UMB5 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smcr8Q3UMB5 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Smcr8Q3UMB5 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.98■□□□□ 0.79
Smcr8Q3UMB5 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smcr8Q3UMB5 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smcr8Q3UMB5 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smcr8Q3UMB5 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.97■□□□□ 0.79
Smcr8Q3UMB5 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smcr8Q3UMB5 Gm37856-201ENSMUST00000191634 999 ntBASIC19.97■□□□□ 0.79
Smcr8Q3UMB5 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smcr8Q3UMB5 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Smcr8Q3UMB5 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smcr8Q3UMB5 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smcr8Q3UMB5 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smcr8Q3UMB5 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Smcr8Q3UMB5 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.96■□□□□ 0.79
Smcr8Q3UMB5 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms