Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
Col5a2Q3U962 AC160393.1-201ENSMUST00000218378 1279 ntBASIC22.39■■□□□ 1.17
Col5a2Q3U962 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Col5a2Q3U962 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC22.39■■□□□ 1.17
Col5a2Q3U962 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Col5a2Q3U962 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Col5a2Q3U962 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Col5a2Q3U962 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Col5a2Q3U962 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC22.38■■□□□ 1.17
Col5a2Q3U962 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Col5a2Q3U962 Gm7367-201ENSMUST00000057611 492 ntBASIC22.38■■□□□ 1.17
Col5a2Q3U962 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Col5a2Q3U962 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Col5a2Q3U962 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Col5a2Q3U962 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Col5a2Q3U962 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Col5a2Q3U962 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Col5a2Q3U962 Gm43183-201ENSMUST00000200632 547 ntBASIC22.37■■□□□ 1.17
Col5a2Q3U962 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Col5a2Q3U962 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Col5a2Q3U962 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Col5a2Q3U962 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Col5a2Q3U962 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Col5a2Q3U962 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Col5a2Q3U962 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Col5a2Q3U962 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Col5a2Q3U962 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
Col5a2Q3U962 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
Col5a2Q3U962 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Col5a2Q3U962 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Col5a2Q3U962 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC22.36■■□□□ 1.17
Col5a2Q3U962 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Col5a2Q3U962 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Col5a2Q3U962 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
Col5a2Q3U962 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Col5a2Q3U962 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Col5a2Q3U962 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC22.35■■□□□ 1.17
Col5a2Q3U962 Gm18025-201ENSMUST00000221733 862 ntBASIC22.35■■□□□ 1.17
Col5a2Q3U962 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Col5a2Q3U962 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Col5a2Q3U962 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Col5a2Q3U962 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Col5a2Q3U962 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Col5a2Q3U962 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Col5a2Q3U962 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC22.34■■□□□ 1.17
Col5a2Q3U962 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Col5a2Q3U962 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Col5a2Q3U962 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Col5a2Q3U962 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Col5a2Q3U962 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Col5a2Q3U962 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC22.34■■□□□ 1.17
Col5a2Q3U962 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Col5a2Q3U962 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC22.34■■□□□ 1.17
Col5a2Q3U962 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Col5a2Q3U962 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Col5a2Q3U962 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Col5a2Q3U962 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Col5a2Q3U962 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Col5a2Q3U962 Zfp783-201ENSMUST00000095946 670 ntBASIC22.33■■□□□ 1.16
Col5a2Q3U962 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Col5a2Q3U962 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Col5a2Q3U962 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Col5a2Q3U962 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Col5a2Q3U962 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Col5a2Q3U962 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Col5a2Q3U962 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC22.32■■□□□ 1.16
Col5a2Q3U962 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Col5a2Q3U962 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col5a2Q3U962 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col5a2Q3U962 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Col5a2Q3U962 Gm6728-201ENSMUST00000178117 1065 ntBASIC22.31■■□□□ 1.16
Col5a2Q3U962 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Col5a2Q3U962 Gm18032-201ENSMUST00000222541 538 ntBASIC22.31■■□□□ 1.16
Col5a2Q3U962 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col5a2Q3U962 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col5a2Q3U962 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col5a2Q3U962 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Col5a2Q3U962 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col5a2Q3U962 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col5a2Q3U962 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Col5a2Q3U962 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Col5a2Q3U962 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Col5a2Q3U962 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC22.3■■□□□ 1.16
Col5a2Q3U962 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC22.3■■□□□ 1.16
Col5a2Q3U962 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC22.3■■□□□ 1.16
Col5a2Q3U962 Timm23-208ENSMUST00000226683 750 ntBASIC22.3■■□□□ 1.16
Col5a2Q3U962 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Col5a2Q3U962 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Col5a2Q3U962 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Col5a2Q3U962 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Col5a2Q3U962 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Col5a2Q3U962 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Col5a2Q3U962 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Col5a2Q3U962 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Col5a2Q3U962 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Col5a2Q3U962 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Col5a2Q3U962 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
Col5a2Q3U962 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Col5a2Q3U962 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Col5a2Q3U962 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC22.28■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms