Protein–RNA interactions for Protein: Q3TX51

Lrrc28, Leucine-rich repeat-containing protein 28, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc28Q3TX51 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lrrc28Q3TX51 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lrrc28Q3TX51 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lrrc28Q3TX51 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lrrc28Q3TX51 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lrrc28Q3TX51 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Lrrc28Q3TX51 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lrrc28Q3TX51 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lrrc28Q3TX51 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lrrc28Q3TX51 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lrrc28Q3TX51 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lrrc28Q3TX51 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lrrc28Q3TX51 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lrrc28Q3TX51 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
Lrrc28Q3TX51 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lrrc28Q3TX51 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lrrc28Q3TX51 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Lrrc28Q3TX51 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lrrc28Q3TX51 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.69■□□□□ 0.42
Lrrc28Q3TX51 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Lrrc28Q3TX51 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lrrc28Q3TX51 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Lrrc28Q3TX51 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lrrc28Q3TX51 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lrrc28Q3TX51 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lrrc28Q3TX51 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lrrc28Q3TX51 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lrrc28Q3TX51 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lrrc28Q3TX51 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.68■□□□□ 0.42
Lrrc28Q3TX51 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lrrc28Q3TX51 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.68■□□□□ 0.42
Lrrc28Q3TX51 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lrrc28Q3TX51 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.68■□□□□ 0.42
Lrrc28Q3TX51 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.68■□□□□ 0.42
Lrrc28Q3TX51 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lrrc28Q3TX51 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lrrc28Q3TX51 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lrrc28Q3TX51 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lrrc28Q3TX51 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lrrc28Q3TX51 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lrrc28Q3TX51 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lrrc28Q3TX51 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.67■□□□□ 0.42
Lrrc28Q3TX51 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lrrc28Q3TX51 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lrrc28Q3TX51 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lrrc28Q3TX51 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Lrrc28Q3TX51 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Lrrc28Q3TX51 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lrrc28Q3TX51 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lrrc28Q3TX51 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lrrc28Q3TX51 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lrrc28Q3TX51 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Lrrc28Q3TX51 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.66■□□□□ 0.42
Lrrc28Q3TX51 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.66■□□□□ 0.42
Lrrc28Q3TX51 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lrrc28Q3TX51 Gm37856-201ENSMUST00000191634 999 ntBASIC17.66■□□□□ 0.42
Lrrc28Q3TX51 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lrrc28Q3TX51 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lrrc28Q3TX51 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrrc28Q3TX51 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrrc28Q3TX51 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lrrc28Q3TX51 Gm22240-201ENSMUST00000175225 82 ntBASIC17.65■□□□□ 0.42
Lrrc28Q3TX51 Gm8520-201ENSMUST00000186517 868 ntBASIC17.65■□□□□ 0.42
Lrrc28Q3TX51 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
Lrrc28Q3TX51 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.65■□□□□ 0.42
Lrrc28Q3TX51 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrrc28Q3TX51 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrrc28Q3TX51 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Lrrc28Q3TX51 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrrc28Q3TX51 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Lrrc28Q3TX51 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lrrc28Q3TX51 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Lrrc28Q3TX51 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lrrc28Q3TX51 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lrrc28Q3TX51 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lrrc28Q3TX51 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.64■□□□□ 0.41
Lrrc28Q3TX51 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.64■□□□□ 0.41
Lrrc28Q3TX51 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Lrrc28Q3TX51 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Lrrc28Q3TX51 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lrrc28Q3TX51 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lrrc28Q3TX51 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lrrc28Q3TX51 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.64■□□□□ 0.41
Lrrc28Q3TX51 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lrrc28Q3TX51 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Lrrc28Q3TX51 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lrrc28Q3TX51 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lrrc28Q3TX51 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.63■□□□□ 0.41
Lrrc28Q3TX51 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Lrrc28Q3TX51 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lrrc28Q3TX51 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lrrc28Q3TX51 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Lrrc28Q3TX51 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Lrrc28Q3TX51 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lrrc28Q3TX51 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lrrc28Q3TX51 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Lrrc28Q3TX51 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Lrrc28Q3TX51 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Lrrc28Q3TX51 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lrrc28Q3TX51 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms