Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Nkx2-3P97334 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Nkx2-3P97334 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Nkx2-3P97334 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Nkx2-3P97334 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC23.75■■□□□ 1.39
Nkx2-3P97334 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Nkx2-3P97334 Wnt10b-205ENSMUST00000226846 1204 ntBASIC23.75■■□□□ 1.39
Nkx2-3P97334 Golph3-202ENSMUST00000226517 2359 ntBASIC23.75■■□□□ 1.39
Nkx2-3P97334 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Nkx2-3P97334 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Nkx2-3P97334 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Nkx2-3P97334 Gm8309-201ENSMUST00000206627 1448 ntBASIC23.75■■□□□ 1.39
Nkx2-3P97334 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Nkx2-3P97334 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Nkx2-3P97334 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Nkx2-3P97334 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Nkx2-3P97334 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Nkx2-3P97334 Gm6576-201ENSMUST00000169678 883 ntBASIC23.74■■□□□ 1.39
Nkx2-3P97334 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC23.74■■□□□ 1.39
Nkx2-3P97334 H2-K2-201ENSMUST00000174250 1049 ntBASIC23.74■■□□□ 1.39
Nkx2-3P97334 AC160393.1-201ENSMUST00000218378 1279 ntBASIC23.74■■□□□ 1.39
Nkx2-3P97334 Arhgef33-211ENSMUST00000225658 473 ntBASIC23.74■■□□□ 1.39
Nkx2-3P97334 AC154649.1-201ENSMUST00000227392 384 ntBASIC23.74■■□□□ 1.39
Nkx2-3P97334 Mtag2-201ENSMUST00000058665 714 ntBASIC23.74■■□□□ 1.39
Nkx2-3P97334 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Nkx2-3P97334 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC23.74■■□□□ 1.39
Nkx2-3P97334 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Nkx2-3P97334 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Nkx2-3P97334 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC23.73■■□□□ 1.39
Nkx2-3P97334 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Nkx2-3P97334 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Nkx2-3P97334 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC23.73■■□□□ 1.39
Nkx2-3P97334 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC23.73■■□□□ 1.39
Nkx2-3P97334 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Nkx2-3P97334 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC23.73■■□□□ 1.39
Nkx2-3P97334 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Nkx2-3P97334 Gm18666-201ENSMUST00000190039 958 ntBASIC23.73■■□□□ 1.39
Nkx2-3P97334 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC23.73■■□□□ 1.39
Nkx2-3P97334 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Nkx2-3P97334 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Nkx2-3P97334 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Nkx2-3P97334 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
Nkx2-3P97334 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Nkx2-3P97334 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Nkx2-3P97334 Gm15565-201ENSMUST00000118890 427 ntBASIC23.72■■□□□ 1.39
Nkx2-3P97334 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC23.72■■□□□ 1.39
Nkx2-3P97334 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Nkx2-3P97334 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Nkx2-3P97334 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Nkx2-3P97334 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC23.72■■□□□ 1.39
Nkx2-3P97334 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Nkx2-3P97334 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC23.71■■□□□ 1.39
Nkx2-3P97334 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Nkx2-3P97334 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Nkx2-3P97334 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Nkx2-3P97334 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC23.71■■□□□ 1.39
Nkx2-3P97334 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Nkx2-3P97334 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Nkx2-3P97334 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Nkx2-3P97334 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Nkx2-3P97334 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Nkx2-3P97334 CT010444.2-201ENSMUST00000217877 1629 ntBASIC23.7■■□□□ 1.39
Nkx2-3P97334 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC23.7■■□□□ 1.38
Nkx2-3P97334 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Nkx2-3P97334 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Nkx2-3P97334 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Nkx2-3P97334 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
Nkx2-3P97334 Gm13158-201ENSMUST00000122007 736 ntBASIC23.7■■□□□ 1.38
Nkx2-3P97334 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.38
Nkx2-3P97334 Alkbh1-212ENSMUST00000185301 408 ntBASIC23.7■■□□□ 1.38
Nkx2-3P97334 Krtap5-1-202ENSMUST00000188274 742 ntBASIC23.7■■□□□ 1.38
Nkx2-3P97334 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC23.7■■□□□ 1.38
Nkx2-3P97334 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Nkx2-3P97334 AC124603.1-201ENSMUST00000223843 308 ntBASIC23.7■■□□□ 1.38
Nkx2-3P97334 Hsf1-204ENSMUST00000226872 2104 ntBASIC23.7■■□□□ 1.38
Nkx2-3P97334 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Nkx2-3P97334 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Nkx2-3P97334 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Nkx2-3P97334 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Nkx2-3P97334 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Nkx2-3P97334 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Nkx2-3P97334 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Nkx2-3P97334 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC23.69■■□□□ 1.38
Nkx2-3P97334 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Nkx2-3P97334 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Nkx2-3P97334 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Nkx2-3P97334 Gm29994-201ENSMUST00000195495 1193 ntBASIC23.69■■□□□ 1.38
Nkx2-3P97334 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Nkx2-3P97334 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Nkx2-3P97334 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Nkx2-3P97334 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Nkx2-3P97334 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Nkx2-3P97334 Gm18688-201ENSMUST00000204695 1859 ntBASIC23.68■■□□□ 1.38
Nkx2-3P97334 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Nkx2-3P97334 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Nkx2-3P97334 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Nkx2-3P97334 Gm7977-201ENSMUST00000193787 748 ntBASIC23.68■■□□□ 1.38
Nkx2-3P97334 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
Nkx2-3P97334 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
Nkx2-3P97334 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms