Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC12.97□□□□□ -0.33
PrkdcP97313 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC12.97□□□□□ -0.33
PrkdcP97313 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
PrkdcP97313 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
PrkdcP97313 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PrkdcP97313 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PrkdcP97313 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PrkdcP97313 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
PrkdcP97313 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PrkdcP97313 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12.97□□□□□ -0.33
PrkdcP97313 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC12.97□□□□□ -0.33
PrkdcP97313 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PrkdcP97313 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PrkdcP97313 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
PrkdcP97313 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PrkdcP97313 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC12.96□□□□□ -0.33
PrkdcP97313 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
PrkdcP97313 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
PrkdcP97313 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.96□□□□□ -0.33
PrkdcP97313 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PrkdcP97313 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PrkdcP97313 AW822252-206ENSMUST00000208904 237 ntBASIC12.96□□□□□ -0.33
PrkdcP97313 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PrkdcP97313 Gm37035-201ENSMUST00000194809 2148 ntBASIC12.96□□□□□ -0.34
PrkdcP97313 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
PrkdcP97313 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
PrkdcP97313 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
PrkdcP97313 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
PrkdcP97313 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
PrkdcP97313 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
PrkdcP97313 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.95□□□□□ -0.34
PrkdcP97313 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PrkdcP97313 Gm37292-201ENSMUST00000192062 758 ntBASIC12.95□□□□□ -0.34
PrkdcP97313 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PrkdcP97313 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
PrkdcP97313 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
PrkdcP97313 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
PrkdcP97313 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PrkdcP97313 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PrkdcP97313 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.95□□□□□ -0.34
PrkdcP97313 Gm17807-201ENSMUST00000186869 298 ntBASIC12.95□□□□□ -0.34
PrkdcP97313 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PrkdcP97313 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PrkdcP97313 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PrkdcP97313 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
PrkdcP97313 Gm32699-201ENSMUST00000221728 1988 ntBASIC12.95□□□□□ -0.34
PrkdcP97313 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PrkdcP97313 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
PrkdcP97313 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
PrkdcP97313 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
PrkdcP97313 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
PrkdcP97313 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
PrkdcP97313 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PrkdcP97313 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PrkdcP97313 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.94□□□□□ -0.34
PrkdcP97313 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PrkdcP97313 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.94□□□□□ -0.34
PrkdcP97313 Gm22697-201ENSMUST00000175194 63 ntBASIC12.94□□□□□ -0.34
PrkdcP97313 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PrkdcP97313 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
PrkdcP97313 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PrkdcP97313 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.94□□□□□ -0.34
PrkdcP97313 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.94□□□□□ -0.34
PrkdcP97313 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
PrkdcP97313 Flg-201ENSMUST00000050758 1488 ntBASIC12.93□□□□□ -0.34
PrkdcP97313 Gm15043-201ENSMUST00000118843 1543 ntBASIC12.93□□□□□ -0.34
PrkdcP97313 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
PrkdcP97313 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
PrkdcP97313 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
PrkdcP97313 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
PrkdcP97313 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
PrkdcP97313 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC12.93□□□□□ -0.34
PrkdcP97313 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PrkdcP97313 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
PrkdcP97313 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PrkdcP97313 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
PrkdcP97313 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PrkdcP97313 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
PrkdcP97313 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PrkdcP97313 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PrkdcP97313 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PrkdcP97313 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
PrkdcP97313 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PrkdcP97313 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PrkdcP97313 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PrkdcP97313 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PrkdcP97313 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
PrkdcP97313 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PrkdcP97313 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
PrkdcP97313 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC12.92□□□□□ -0.34
PrkdcP97313 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PrkdcP97313 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC12.92□□□□□ -0.34
PrkdcP97313 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PrkdcP97313 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PrkdcP97313 AC124581.1-201ENSMUST00000225416 1399 ntBASIC12.91□□□□□ -0.34
PrkdcP97313 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PrkdcP97313 Gm15375-201ENSMUST00000119510 849 ntBASIC12.91□□□□□ -0.34
PrkdcP97313 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
PrkdcP97313 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PrkdcP97313 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms