Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim43bP86448 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.17■□□□□ 0.66
Trim43bP86448 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.17■□□□□ 0.66
Trim43bP86448 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim43bP86448 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Trim43bP86448 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim43bP86448 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Trim43bP86448 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Trim43bP86448 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim43bP86448 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim43bP86448 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim43bP86448 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trim43bP86448 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim43bP86448 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.16■□□□□ 0.66
Trim43bP86448 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trim43bP86448 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Trim43bP86448 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim43bP86448 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trim43bP86448 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trim43bP86448 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Trim43bP86448 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Trim43bP86448 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Trim43bP86448 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim43bP86448 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim43bP86448 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim43bP86448 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim43bP86448 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim43bP86448 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Trim43bP86448 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Trim43bP86448 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim43bP86448 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim43bP86448 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim43bP86448 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim43bP86448 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim43bP86448 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.15■□□□□ 0.66
Trim43bP86448 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim43bP86448 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.15■□□□□ 0.66
Trim43bP86448 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim43bP86448 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.15■□□□□ 0.66
Trim43bP86448 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim43bP86448 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim43bP86448 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim43bP86448 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim43bP86448 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trim43bP86448 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim43bP86448 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim43bP86448 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trim43bP86448 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.14■□□□□ 0.65
Trim43bP86448 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.14■□□□□ 0.65
Trim43bP86448 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Trim43bP86448 Gm10493-201ENSMUST00000097270 612 ntBASIC19.14■□□□□ 0.65
Trim43bP86448 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trim43bP86448 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim43bP86448 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim43bP86448 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim43bP86448 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim43bP86448 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim43bP86448 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim43bP86448 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim43bP86448 Gm11421-201ENSMUST00000122124 294 ntBASIC19.13■□□□□ 0.65
Trim43bP86448 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim43bP86448 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim43bP86448 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trim43bP86448 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.13■□□□□ 0.65
Trim43bP86448 Gm5874-201ENSMUST00000096101 508 ntBASIC19.13■□□□□ 0.65
Trim43bP86448 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim43bP86448 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.13■□□□□ 0.65
Trim43bP86448 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.13■□□□□ 0.65
Trim43bP86448 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trim43bP86448 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trim43bP86448 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Trim43bP86448 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim43bP86448 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.12■□□□□ 0.65
Trim43bP86448 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim43bP86448 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Trim43bP86448 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Trim43bP86448 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.12■□□□□ 0.65
Trim43bP86448 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim43bP86448 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim43bP86448 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim43bP86448 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
Trim43bP86448 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim43bP86448 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trim43bP86448 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim43bP86448 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Trim43bP86448 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Trim43bP86448 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim43bP86448 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.11■□□□□ 0.65
Trim43bP86448 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Trim43bP86448 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim43bP86448 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim43bP86448 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.1■□□□□ 0.65
Trim43bP86448 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim43bP86448 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim43bP86448 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.1■□□□□ 0.65
Trim43bP86448 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
Trim43bP86448 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim43bP86448 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim43bP86448 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim43bP86448 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms