Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Crnkl1P63154 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.54
Crnkl1P63154 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Crnkl1P63154 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Crnkl1P63154 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Crnkl1P63154 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Crnkl1P63154 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Crnkl1P63154 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Crnkl1P63154 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Crnkl1P63154 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.45■□□□□ 0.54
Crnkl1P63154 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Crnkl1P63154 Gm7143-201ENSMUST00000222811 859 ntBASIC18.45■□□□□ 0.54
Crnkl1P63154 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.45■□□□□ 0.54
Crnkl1P63154 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Crnkl1P63154 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Crnkl1P63154 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Crnkl1P63154 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Crnkl1P63154 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.45■□□□□ 0.54
Crnkl1P63154 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Crnkl1P63154 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Crnkl1P63154 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
Crnkl1P63154 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Crnkl1P63154 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Crnkl1P63154 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Crnkl1P63154 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Crnkl1P63154 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.44■□□□□ 0.54
Crnkl1P63154 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Crnkl1P63154 Gm13241-201ENSMUST00000094493 780 ntBASIC18.44■□□□□ 0.54
Crnkl1P63154 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Crnkl1P63154 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Crnkl1P63154 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Crnkl1P63154 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Crnkl1P63154 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
Crnkl1P63154 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Crnkl1P63154 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Crnkl1P63154 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.43■□□□□ 0.54
Crnkl1P63154 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Crnkl1P63154 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Crnkl1P63154 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Crnkl1P63154 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Crnkl1P63154 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Crnkl1P63154 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Crnkl1P63154 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Crnkl1P63154 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.43■□□□□ 0.54
Crnkl1P63154 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Crnkl1P63154 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
Crnkl1P63154 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Crnkl1P63154 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.42■□□□□ 0.54
Crnkl1P63154 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.42■□□□□ 0.54
Crnkl1P63154 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Crnkl1P63154 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
Crnkl1P63154 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Crnkl1P63154 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Crnkl1P63154 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Crnkl1P63154 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.42■□□□□ 0.54
Crnkl1P63154 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Crnkl1P63154 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Crnkl1P63154 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Crnkl1P63154 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Crnkl1P63154 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Crnkl1P63154 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Crnkl1P63154 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Crnkl1P63154 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Crnkl1P63154 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Crnkl1P63154 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Crnkl1P63154 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Crnkl1P63154 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Crnkl1P63154 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Crnkl1P63154 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.41■□□□□ 0.54
Crnkl1P63154 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.41■□□□□ 0.54
Crnkl1P63154 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.41■□□□□ 0.54
Crnkl1P63154 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Crnkl1P63154 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
Crnkl1P63154 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Crnkl1P63154 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Crnkl1P63154 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Crnkl1P63154 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Crnkl1P63154 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Crnkl1P63154 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Crnkl1P63154 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Crnkl1P63154 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Crnkl1P63154 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Crnkl1P63154 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Crnkl1P63154 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.4■□□□□ 0.54
Crnkl1P63154 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.4■□□□□ 0.54
Crnkl1P63154 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Crnkl1P63154 Mir6236-201ENSMUST00000184437 123 ntBASIC18.4■□□□□ 0.54
Crnkl1P63154 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Crnkl1P63154 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Crnkl1P63154 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Crnkl1P63154 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Crnkl1P63154 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Crnkl1P63154 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Crnkl1P63154 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Crnkl1P63154 Golgb1-201ENSMUST00000023534 498 ntBASIC18.39■□□□□ 0.53
Crnkl1P63154 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Crnkl1P63154 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Crnkl1P63154 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Crnkl1P63154 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Crnkl1P63154 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms