Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpl39P62892 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rpl39P62892 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpl39P62892 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpl39P62892 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpl39P62892 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpl39P62892 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpl39P62892 Shroom3-211ENSMUST00000225438 5742 ntBASIC13.33□□□□□ -0.28
Rpl39P62892 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpl39P62892 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rpl39P62892 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpl39P62892 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpl39P62892 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Rpl39P62892 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rpl39P62892 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Rpl39P62892 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Rpl39P62892 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpl39P62892 Krt8-ps-201ENSMUST00000208495 945 ntBASIC13.32□□□□□ -0.28
Rpl39P62892 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rpl39P62892 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpl39P62892 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpl39P62892 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rpl39P62892 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rpl39P62892 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpl39P62892 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpl39P62892 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpl39P62892 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpl39P62892 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpl39P62892 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpl39P62892 Gm42922-201ENSMUST00000195887 2078 ntBASIC13.32□□□□□ -0.28
Rpl39P62892 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpl39P62892 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Rpl39P62892 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpl39P62892 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpl39P62892 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpl39P62892 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpl39P62892 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpl39P62892 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Rpl39P62892 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Rpl39P62892 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpl39P62892 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpl39P62892 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpl39P62892 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Rpl39P62892 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpl39P62892 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC13.31□□□□□ -0.28
Rpl39P62892 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpl39P62892 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpl39P62892 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpl39P62892 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpl39P62892 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpl39P62892 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl39P62892 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl39P62892 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl39P62892 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl39P62892 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC13.3□□□□□ -0.28
Rpl39P62892 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC13.3□□□□□ -0.28
Rpl39P62892 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl39P62892 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl39P62892 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl39P62892 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl39P62892 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl39P62892 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Rpl39P62892 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl39P62892 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl39P62892 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC13.3□□□□□ -0.28
Rpl39P62892 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Rpl39P62892 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpl39P62892 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpl39P62892 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpl39P62892 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC13.29□□□□□ -0.28
Rpl39P62892 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpl39P62892 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpl39P62892 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpl39P62892 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Rpl39P62892 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpl39P62892 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rpl39P62892 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC13.29□□□□□ -0.28
Rpl39P62892 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpl39P62892 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rpl39P62892 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpl39P62892 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpl39P62892 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rpl39P62892 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpl39P62892 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rpl39P62892 Gm8770-201ENSMUST00000121113 1109 ntBASIC13.28□□□□□ -0.28
Rpl39P62892 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpl39P62892 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpl39P62892 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC13.28□□□□□ -0.28
Rpl39P62892 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Rpl39P62892 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Rpl39P62892 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpl39P62892 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpl39P62892 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpl39P62892 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rpl39P62892 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rpl39P62892 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Rpl39P62892 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Rpl39P62892 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rpl39P62892 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Rpl39P62892 Gm43702-201ENSMUST00000198772 2546 ntBASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms