Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rps28P62858 Gm37912-201ENSMUST00000191895 3076 ntBASIC11.19□□□□□ -0.62
Rps28P62858 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rps28P62858 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rps28P62858 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Rps28P62858 Rncr4-201ENSMUST00000194541 2234 ntBASIC11.19□□□□□ -0.62
Rps28P62858 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rps28P62858 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC11.18□□□□□ -0.62
Rps28P62858 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rps28P62858 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rps28P62858 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rps28P62858 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rps28P62858 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rps28P62858 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rps28P62858 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Rps28P62858 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rps28P62858 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rps28P62858 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rps28P62858 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rps28P62858 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rps28P62858 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rps28P62858 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rps28P62858 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Rps28P62858 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rps28P62858 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rps28P62858 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rps28P62858 Gm10710-201ENSMUST00000047876 3971 ntBASIC11.18□□□□□ -0.62
Rps28P62858 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rps28P62858 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rps28P62858 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rps28P62858 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC11.17□□□□□ -0.62
Rps28P62858 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rps28P62858 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rps28P62858 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rps28P62858 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rps28P62858 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rps28P62858 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
Rps28P62858 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rps28P62858 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rps28P62858 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rps28P62858 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rps28P62858 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rps28P62858 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC11.17□□□□□ -0.62
Rps28P62858 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rps28P62858 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rps28P62858 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Rps28P62858 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rps28P62858 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC11.17□□□□□ -0.62
Rps28P62858 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rps28P62858 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rps28P62858 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rps28P62858 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Rps28P62858 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rps28P62858 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rps28P62858 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rps28P62858 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC11.16□□□□□ -0.62
Rps28P62858 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rps28P62858 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rps28P62858 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rps28P62858 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Rps28P62858 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rps28P62858 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rps28P62858 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC11.16□□□□□ -0.62
Rps28P62858 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rps28P62858 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rps28P62858 Gm5828-201ENSMUST00000071842 1860 ntBASIC11.16□□□□□ -0.62
Rps28P62858 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rps28P62858 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rps28P62858 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rps28P62858 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rps28P62858 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rps28P62858 Gm15853-202ENSMUST00000195518 2041 ntBASIC11.15□□□□□ -0.62
Rps28P62858 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rps28P62858 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rps28P62858 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rps28P62858 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rps28P62858 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rps28P62858 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC11.15□□□□□ -0.62
Rps28P62858 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Rps28P62858 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Rps28P62858 AC164433.2-201ENSMUST00000226346 1701 ntBASIC11.15□□□□□ -0.63
Rps28P62858 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Rps28P62858 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Rps28P62858 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Rps28P62858 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Rps28P62858 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Rps28P62858 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Rps28P62858 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Rps28P62858 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rps28P62858 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Rps28P62858 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rps28P62858 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Rps28P62858 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rps28P62858 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rps28P62858 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Rps28P62858 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rps28P62858 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rps28P62858 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rps28P62858 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rps28P62858 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms