Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm6P62313 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm6P62313 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm6P62313 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm6P62313 Gm13234-201ENSMUST00000120010 747 ntBASIC16.37■□□□□ 0.21
Lsm6P62313 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm6P62313 Gm10493-201ENSMUST00000097270 612 ntBASIC16.37■□□□□ 0.21
Lsm6P62313 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Lsm6P62313 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm6P62313 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm6P62313 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm6P62313 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm6P62313 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm6P62313 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.37■□□□□ 0.21
Lsm6P62313 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm6P62313 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm6P62313 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Lsm6P62313 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm6P62313 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm6P62313 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm6P62313 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm6P62313 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm6P62313 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.36■□□□□ 0.21
Lsm6P62313 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm6P62313 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm6P62313 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm6P62313 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm6P62313 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC16.36■□□□□ 0.21
Lsm6P62313 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Lsm6P62313 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm6P62313 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm6P62313 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm6P62313 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm6P62313 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Lsm6P62313 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm6P62313 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm6P62313 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm6P62313 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm6P62313 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm6P62313 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm6P62313 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm6P62313 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.35■□□□□ 0.21
Lsm6P62313 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm6P62313 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.35■□□□□ 0.21
Lsm6P62313 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Lsm6P62313 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Lsm6P62313 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm6P62313 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm6P62313 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm6P62313 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm6P62313 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm6P62313 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm6P62313 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.35■□□□□ 0.21
Lsm6P62313 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm6P62313 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Lsm6P62313 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.34■□□□□ 0.21
Lsm6P62313 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm6P62313 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm6P62313 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm6P62313 Gm13534-201ENSMUST00000121169 513 ntBASIC16.34■□□□□ 0.21
Lsm6P62313 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Lsm6P62313 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm6P62313 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm6P62313 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm6P62313 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.33■□□□□ 0.21
Lsm6P62313 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lsm6P62313 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Lsm6P62313 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Lsm6P62313 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lsm6P62313 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.33■□□□□ 0.21
Lsm6P62313 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm6P62313 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.33■□□□□ 0.2
Lsm6P62313 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm6P62313 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Lsm6P62313 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm6P62313 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.33■□□□□ 0.2
Lsm6P62313 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.33■□□□□ 0.2
Lsm6P62313 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm6P62313 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm6P62313 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm6P62313 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lsm6P62313 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm6P62313 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm6P62313 Gm42778-201ENSMUST00000199644 553 ntBASIC16.32■□□□□ 0.2
Lsm6P62313 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.32■□□□□ 0.2
Lsm6P62313 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm6P62313 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm6P62313 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm6P62313 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm6P62313 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Lsm6P62313 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Lsm6P62313 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm6P62313 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lsm6P62313 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm6P62313 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm6P62313 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm6P62313 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm6P62313 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.31■□□□□ 0.2
Lsm6P62313 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lsm6P62313 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms