Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NcanP55066 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.9■□□□□ 0.78
NcanP55066 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NcanP55066 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
NcanP55066 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NcanP55066 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
NcanP55066 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC19.89■□□□□ 0.77
NcanP55066 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NcanP55066 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NcanP55066 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NcanP55066 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NcanP55066 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NcanP55066 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NcanP55066 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NcanP55066 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NcanP55066 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NcanP55066 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NcanP55066 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NcanP55066 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NcanP55066 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
NcanP55066 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC19.88■□□□□ 0.77
NcanP55066 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NcanP55066 Gm43514-201ENSMUST00000198852 424 ntBASIC19.88■□□□□ 0.77
NcanP55066 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.88■□□□□ 0.77
NcanP55066 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NcanP55066 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NcanP55066 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.88■□□□□ 0.77
NcanP55066 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NcanP55066 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.87■□□□□ 0.77
NcanP55066 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.87■□□□□ 0.77
NcanP55066 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
NcanP55066 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.87■□□□□ 0.77
NcanP55066 Gm10013-201ENSMUST00000106074 672 ntBASIC19.87■□□□□ 0.77
NcanP55066 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.87■□□□□ 0.77
NcanP55066 Gm18025-201ENSMUST00000221733 862 ntBASIC19.87■□□□□ 0.77
NcanP55066 Odf3b-204ENSMUST00000227834 930 ntBASIC19.87■□□□□ 0.77
NcanP55066 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NcanP55066 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
NcanP55066 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NcanP55066 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NcanP55066 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
NcanP55066 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NcanP55066 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NcanP55066 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NcanP55066 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NcanP55066 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.86■□□□□ 0.77
NcanP55066 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NcanP55066 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NcanP55066 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NcanP55066 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NcanP55066 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NcanP55066 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
NcanP55066 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
NcanP55066 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NcanP55066 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
NcanP55066 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NcanP55066 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NcanP55066 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.84■□□□□ 0.77
NcanP55066 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
NcanP55066 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NcanP55066 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NcanP55066 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.84■□□□□ 0.77
NcanP55066 Gm37292-201ENSMUST00000192062 758 ntBASIC19.84■□□□□ 0.77
NcanP55066 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NcanP55066 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
NcanP55066 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.84■□□□□ 0.77
NcanP55066 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.84■□□□□ 0.77
NcanP55066 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NcanP55066 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NcanP55066 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NcanP55066 AA414768-201ENSMUST00000121924 1257 ntBASIC19.83■□□□□ 0.77
NcanP55066 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NcanP55066 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.83■□□□□ 0.77
NcanP55066 Timm23-208ENSMUST00000226683 750 ntBASIC19.83■□□□□ 0.77
NcanP55066 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NcanP55066 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
NcanP55066 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NcanP55066 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.83■□□□□ 0.76
NcanP55066 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NcanP55066 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NcanP55066 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
NcanP55066 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NcanP55066 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
NcanP55066 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NcanP55066 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NcanP55066 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.82■□□□□ 0.76
NcanP55066 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NcanP55066 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NcanP55066 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NcanP55066 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NcanP55066 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NcanP55066 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
NcanP55066 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NcanP55066 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.81■□□□□ 0.76
NcanP55066 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
NcanP55066 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NcanP55066 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.81■□□□□ 0.76
NcanP55066 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.81■□□□□ 0.76
NcanP55066 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NcanP55066 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms