Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atxn1P54254 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atxn1P54254 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atxn1P54254 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atxn1P54254 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Atxn1P54254 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atxn1P54254 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Atxn1P54254 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Atxn1P54254 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.52■□□□□ 0.56
Atxn1P54254 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Atxn1P54254 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Atxn1P54254 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Atxn1P54254 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Atxn1P54254 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Atxn1P54254 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.51■□□□□ 0.55
Atxn1P54254 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.51■□□□□ 0.55
Atxn1P54254 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atxn1P54254 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atxn1P54254 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atxn1P54254 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atxn1P54254 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Atxn1P54254 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Atxn1P54254 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atxn1P54254 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Atxn1P54254 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Atxn1P54254 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Atxn1P54254 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Atxn1P54254 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atxn1P54254 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Atxn1P54254 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atxn1P54254 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atxn1P54254 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atxn1P54254 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Atxn1P54254 Gm10698-201ENSMUST00000182663 604 ntBASIC18.5■□□□□ 0.55
Atxn1P54254 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Atxn1P54254 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.5■□□□□ 0.55
Atxn1P54254 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.5■□□□□ 0.55
Atxn1P54254 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Atxn1P54254 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
Atxn1P54254 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Atxn1P54254 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Atxn1P54254 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atxn1P54254 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atxn1P54254 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Atxn1P54254 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atxn1P54254 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atxn1P54254 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Atxn1P54254 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atxn1P54254 Gm21362-201ENSMUST00000194272 928 ntBASIC18.49■□□□□ 0.55
Atxn1P54254 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atxn1P54254 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atxn1P54254 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atxn1P54254 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Atxn1P54254 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Atxn1P54254 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Atxn1P54254 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.49■□□□□ 0.55
Atxn1P54254 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atxn1P54254 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atxn1P54254 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Atxn1P54254 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
Atxn1P54254 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Atxn1P54254 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.48■□□□□ 0.55
Atxn1P54254 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.48■□□□□ 0.55
Atxn1P54254 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.48■□□□□ 0.55
Atxn1P54254 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.48■□□□□ 0.55
Atxn1P54254 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atxn1P54254 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atxn1P54254 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Atxn1P54254 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atxn1P54254 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.48■□□□□ 0.55
Atxn1P54254 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Atxn1P54254 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Atxn1P54254 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Atxn1P54254 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.47■□□□□ 0.55
Atxn1P54254 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Atxn1P54254 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.47■□□□□ 0.55
Atxn1P54254 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atxn1P54254 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.47■□□□□ 0.55
Atxn1P54254 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atxn1P54254 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atxn1P54254 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Atxn1P54254 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Atxn1P54254 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.47■□□□□ 0.55
Atxn1P54254 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atxn1P54254 Dio3-201ENSMUST00000097228 1449 ntBASIC18.47■□□□□ 0.55
Atxn1P54254 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Atxn1P54254 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atxn1P54254 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.46■□□□□ 0.55
Atxn1P54254 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atxn1P54254 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atxn1P54254 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Atxn1P54254 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.46■□□□□ 0.55
Atxn1P54254 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.46■□□□□ 0.55
Atxn1P54254 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Atxn1P54254 Mir1199-201ENSMUST00000117015 119 ntBASIC18.46■□□□□ 0.55
Atxn1P54254 Gm10231-201ENSMUST00000181584 441 ntBASIC18.46■□□□□ 0.55
Atxn1P54254 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Atxn1P54254 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.46■□□□□ 0.55
Atxn1P54254 Gm10175-202ENSMUST00000208752 441 ntBASIC18.46■□□□□ 0.55
Atxn1P54254 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms