Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm17661-201ENSMUST00000170317 270 ntBASIC19.17■□□□□ 0.66
Sox1P53783 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sox1P53783 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sox1P53783 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.17■□□□□ 0.66
Sox1P53783 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sox1P53783 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sox1P53783 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sox1P53783 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sox1P53783 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sox1P53783 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Sox1P53783 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.16■□□□□ 0.66
Sox1P53783 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.16■□□□□ 0.66
Sox1P53783 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sox1P53783 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Sox1P53783 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sox1P53783 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.16■□□□□ 0.66
Sox1P53783 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.16■□□□□ 0.66
Sox1P53783 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sox1P53783 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sox1P53783 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.16■□□□□ 0.66
Sox1P53783 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sox1P53783 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sox1P53783 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sox1P53783 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.15■□□□□ 0.66
Sox1P53783 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sox1P53783 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sox1P53783 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sox1P53783 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sox1P53783 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sox1P53783 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sox1P53783 Mtag2-201ENSMUST00000058665 714 ntBASIC19.15■□□□□ 0.66
Sox1P53783 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sox1P53783 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Sox1P53783 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Sox1P53783 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Sox1P53783 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Sox1P53783 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sox1P53783 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sox1P53783 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sox1P53783 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Sox1P53783 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sox1P53783 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Sox1P53783 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sox1P53783 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Sox1P53783 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sox1P53783 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Sox1P53783 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sox1P53783 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sox1P53783 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sox1P53783 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sox1P53783 Flg-201ENSMUST00000050758 1488 ntBASIC19.14■□□□□ 0.65
Sox1P53783 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Sox1P53783 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sox1P53783 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sox1P53783 Gm7153-201ENSMUST00000117092 455 ntBASIC19.13■□□□□ 0.65
Sox1P53783 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sox1P53783 Gm45058-201ENSMUST00000205810 766 ntBASIC19.13■□□□□ 0.65
Sox1P53783 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sox1P53783 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Sox1P53783 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sox1P53783 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sox1P53783 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sox1P53783 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sox1P53783 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sox1P53783 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.12■□□□□ 0.65
Sox1P53783 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
Sox1P53783 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sox1P53783 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.12■□□□□ 0.65
Sox1P53783 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Sox1P53783 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Sox1P53783 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sox1P53783 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sox1P53783 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sox1P53783 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.11■□□□□ 0.65
Sox1P53783 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sox1P53783 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Sox1P53783 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sox1P53783 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Sox1P53783 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sox1P53783 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sox1P53783 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.11■□□□□ 0.65
Sox1P53783 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Sox1P53783 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Sox1P53783 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Sox1P53783 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Sox1P53783 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
Sox1P53783 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sox1P53783 Gm43514-201ENSMUST00000198852 424 ntBASIC19.1■□□□□ 0.65
Sox1P53783 Umpk-ps-201ENSMUST00000211897 827 ntBASIC19.1■□□□□ 0.65
Sox1P53783 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sox1P53783 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sox1P53783 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.1■□□□□ 0.65
Sox1P53783 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sox1P53783 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sox1P53783 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sox1P53783 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sox1P53783 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Sox1P53783 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sox1P53783 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC19.09■□□□□ 0.65
Sox1P53783 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms