Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pdx1P52946 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pdx1P52946 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.49■□□□□ 0.55
Pdx1P52946 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.49■□□□□ 0.55
Pdx1P52946 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pdx1P52946 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pdx1P52946 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pdx1P52946 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pdx1P52946 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pdx1P52946 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdx1P52946 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdx1P52946 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.48■□□□□ 0.55
Pdx1P52946 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Pdx1P52946 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.48■□□□□ 0.55
Pdx1P52946 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Pdx1P52946 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pdx1P52946 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Pdx1P52946 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pdx1P52946 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdx1P52946 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdx1P52946 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdx1P52946 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdx1P52946 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdx1P52946 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdx1P52946 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdx1P52946 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdx1P52946 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdx1P52946 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.47■□□□□ 0.55
Pdx1P52946 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.47■□□□□ 0.55
Pdx1P52946 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdx1P52946 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.47■□□□□ 0.55
Pdx1P52946 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdx1P52946 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Pdx1P52946 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.47■□□□□ 0.55
Pdx1P52946 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pdx1P52946 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdx1P52946 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Pdx1P52946 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Pdx1P52946 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdx1P52946 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdx1P52946 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pdx1P52946 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdx1P52946 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdx1P52946 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdx1P52946 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdx1P52946 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdx1P52946 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdx1P52946 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.46■□□□□ 0.55
Pdx1P52946 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pdx1P52946 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pdx1P52946 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pdx1P52946 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pdx1P52946 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pdx1P52946 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.46■□□□□ 0.55
Pdx1P52946 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pdx1P52946 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pdx1P52946 Gm27405-201ENSMUST00000184201 112 ntBASIC18.46■□□□□ 0.55
Pdx1P52946 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.46■□□□□ 0.55
Pdx1P52946 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.46■□□□□ 0.55
Pdx1P52946 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pdx1P52946 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pdx1P52946 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pdx1P52946 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pdx1P52946 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pdx1P52946 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pdx1P52946 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.45■□□□□ 0.54
Pdx1P52946 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pdx1P52946 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pdx1P52946 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pdx1P52946 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.45■□□□□ 0.54
Pdx1P52946 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pdx1P52946 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pdx1P52946 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pdx1P52946 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pdx1P52946 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pdx1P52946 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Pdx1P52946 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pdx1P52946 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Pdx1P52946 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.45■□□□□ 0.54
Pdx1P52946 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pdx1P52946 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.44■□□□□ 0.54
Pdx1P52946 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pdx1P52946 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pdx1P52946 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pdx1P52946 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pdx1P52946 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pdx1P52946 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pdx1P52946 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pdx1P52946 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pdx1P52946 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pdx1P52946 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pdx1P52946 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pdx1P52946 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pdx1P52946 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Pdx1P52946 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pdx1P52946 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pdx1P52946 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pdx1P52946 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Pdx1P52946 Gm7291-201ENSMUST00000199147 382 ntBASIC18.43■□□□□ 0.54
Pdx1P52946 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms