Protein–RNA interactions for Protein: P50516

Atp6v1a, V-type proton ATPase catalytic subunit A, mousemouse

Known RBP Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1aP50516 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Atp6v1aP50516 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Atp6v1aP50516 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Atp6v1aP50516 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC22.5■■□□□ 1.19
Atp6v1aP50516 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC22.5■■□□□ 1.19
Atp6v1aP50516 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC22.5■■□□□ 1.19
Atp6v1aP50516 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
Atp6v1aP50516 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Atp6v1aP50516 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
Atp6v1aP50516 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC22.5■■□□□ 1.19
Atp6v1aP50516 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC22.5■■□□□ 1.19
Atp6v1aP50516 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Atp6v1aP50516 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Atp6v1aP50516 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC22.5■■□□□ 1.19
Atp6v1aP50516 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Atp6v1aP50516 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Atp6v1aP50516 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Atp6v1aP50516 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Atp6v1aP50516 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Atp6v1aP50516 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Atp6v1aP50516 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Atp6v1aP50516 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC22.49■■□□□ 1.19
Atp6v1aP50516 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Atp6v1aP50516 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Atp6v1aP50516 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Atp6v1aP50516 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Atp6v1aP50516 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Atp6v1aP50516 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Atp6v1aP50516 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Atp6v1aP50516 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Atp6v1aP50516 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Atp6v1aP50516 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC22.48■■□□□ 1.19
Atp6v1aP50516 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Atp6v1aP50516 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Atp6v1aP50516 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Atp6v1aP50516 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC22.48■■□□□ 1.19
Atp6v1aP50516 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Atp6v1aP50516 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Atp6v1aP50516 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Atp6v1aP50516 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Atp6v1aP50516 Gm11643-201ENSMUST00000119578 864 ntBASIC22.47■■□□□ 1.19
Atp6v1aP50516 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Atp6v1aP50516 Gm9987-201ENSMUST00000069768 567 ntBASIC22.47■■□□□ 1.19
Atp6v1aP50516 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Atp6v1aP50516 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Atp6v1aP50516 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Atp6v1aP50516 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC22.47■■□□□ 1.19
Atp6v1aP50516 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Atp6v1aP50516 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Atp6v1aP50516 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Atp6v1aP50516 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
Atp6v1aP50516 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Atp6v1aP50516 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
Atp6v1aP50516 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC22.46■■□□□ 1.19
Atp6v1aP50516 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Atp6v1aP50516 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC22.46■■□□□ 1.19
Atp6v1aP50516 Gm20472-201ENSMUST00000174403 1240 ntBASIC22.46■■□□□ 1.19
Atp6v1aP50516 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Atp6v1aP50516 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Atp6v1aP50516 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Atp6v1aP50516 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Atp6v1aP50516 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Atp6v1aP50516 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Atp6v1aP50516 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Atp6v1aP50516 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Atp6v1aP50516 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Atp6v1aP50516 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Atp6v1aP50516 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Atp6v1aP50516 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Atp6v1aP50516 Gm11927-201ENSMUST00000118472 759 ntBASIC22.45■■□□□ 1.18
Atp6v1aP50516 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Atp6v1aP50516 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Atp6v1aP50516 AC153881.2-201ENSMUST00000214877 204 ntBASIC22.45■■□□□ 1.18
Atp6v1aP50516 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Atp6v1aP50516 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.18
Atp6v1aP50516 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Atp6v1aP50516 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Atp6v1aP50516 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Atp6v1aP50516 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Atp6v1aP50516 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Atp6v1aP50516 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Atp6v1aP50516 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Atp6v1aP50516 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Atp6v1aP50516 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Atp6v1aP50516 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Atp6v1aP50516 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Atp6v1aP50516 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Atp6v1aP50516 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Atp6v1aP50516 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Atp6v1aP50516 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Atp6v1aP50516 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Atp6v1aP50516 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Atp6v1aP50516 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Atp6v1aP50516 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Atp6v1aP50516 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Atp6v1aP50516 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Atp6v1aP50516 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Atp6v1aP50516 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Atp6v1aP50516 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Atp6v1aP50516 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms