Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Shmt1P50431 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Shmt1P50431 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shmt1P50431 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shmt1P50431 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shmt1P50431 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Shmt1P50431 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shmt1P50431 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shmt1P50431 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Shmt1P50431 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.78■□□□□ 0.76
Shmt1P50431 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shmt1P50431 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shmt1P50431 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shmt1P50431 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shmt1P50431 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Shmt1P50431 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shmt1P50431 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Shmt1P50431 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Shmt1P50431 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.77■□□□□ 0.76
Shmt1P50431 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Shmt1P50431 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Shmt1P50431 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Shmt1P50431 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.77■□□□□ 0.76
Shmt1P50431 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Shmt1P50431 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Shmt1P50431 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.77■□□□□ 0.76
Shmt1P50431 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
Shmt1P50431 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Shmt1P50431 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Shmt1P50431 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Shmt1P50431 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Shmt1P50431 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shmt1P50431 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shmt1P50431 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shmt1P50431 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Shmt1P50431 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shmt1P50431 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shmt1P50431 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shmt1P50431 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shmt1P50431 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shmt1P50431 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shmt1P50431 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shmt1P50431 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Shmt1P50431 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Shmt1P50431 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shmt1P50431 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shmt1P50431 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shmt1P50431 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shmt1P50431 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shmt1P50431 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Shmt1P50431 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shmt1P50431 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.75■□□□□ 0.75
Shmt1P50431 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shmt1P50431 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shmt1P50431 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shmt1P50431 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shmt1P50431 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shmt1P50431 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Shmt1P50431 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shmt1P50431 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shmt1P50431 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Shmt1P50431 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shmt1P50431 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Shmt1P50431 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Shmt1P50431 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.74■□□□□ 0.75
Shmt1P50431 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shmt1P50431 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shmt1P50431 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Shmt1P50431 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shmt1P50431 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.74■□□□□ 0.75
Shmt1P50431 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.74■□□□□ 0.75
Shmt1P50431 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shmt1P50431 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shmt1P50431 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Shmt1P50431 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Shmt1P50431 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shmt1P50431 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Shmt1P50431 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Shmt1P50431 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Shmt1P50431 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.74■□□□□ 0.75
Shmt1P50431 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Shmt1P50431 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shmt1P50431 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Shmt1P50431 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Shmt1P50431 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Shmt1P50431 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Shmt1P50431 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shmt1P50431 Gm4968-201ENSMUST00000071458 858 ntBASIC19.73■□□□□ 0.75
Shmt1P50431 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Shmt1P50431 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Shmt1P50431 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shmt1P50431 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shmt1P50431 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shmt1P50431 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Shmt1P50431 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shmt1P50431 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shmt1P50431 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shmt1P50431 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Shmt1P50431 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.72■□□□□ 0.75
Shmt1P50431 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms