Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GdnfP48540 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GdnfP48540 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GdnfP48540 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GdnfP48540 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GdnfP48540 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GdnfP48540 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GdnfP48540 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC16.31■□□□□ 0.2
GdnfP48540 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.31■□□□□ 0.2
GdnfP48540 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.31■□□□□ 0.2
GdnfP48540 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GdnfP48540 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GdnfP48540 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
GdnfP48540 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
GdnfP48540 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
GdnfP48540 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GdnfP48540 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.3■□□□□ 0.2
GdnfP48540 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GdnfP48540 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GdnfP48540 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
GdnfP48540 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
GdnfP48540 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GdnfP48540 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GdnfP48540 Mir7075-201ENSMUST00000184187 82 ntBASIC16.3■□□□□ 0.2
GdnfP48540 Spcs1-204ENSMUST00000226782 949 ntBASIC16.3■□□□□ 0.2
GdnfP48540 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
GdnfP48540 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GdnfP48540 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GdnfP48540 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
GdnfP48540 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
GdnfP48540 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GdnfP48540 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.3■□□□□ 0.2
GdnfP48540 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GdnfP48540 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
GdnfP48540 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
GdnfP48540 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GdnfP48540 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GdnfP48540 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GdnfP48540 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.29■□□□□ 0.2
GdnfP48540 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GdnfP48540 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GdnfP48540 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GdnfP48540 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.29■□□□□ 0.2
GdnfP48540 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC16.29■□□□□ 0.2
GdnfP48540 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.29■□□□□ 0.2
GdnfP48540 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.29■□□□□ 0.2
GdnfP48540 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC16.29■□□□□ 0.2
GdnfP48540 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
GdnfP48540 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GdnfP48540 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GdnfP48540 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GdnfP48540 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.29■□□□□ 0.2
GdnfP48540 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GdnfP48540 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GdnfP48540 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GdnfP48540 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GdnfP48540 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GdnfP48540 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GdnfP48540 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GdnfP48540 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GdnfP48540 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GdnfP48540 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GdnfP48540 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GdnfP48540 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.28■□□□□ 0.2
GdnfP48540 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GdnfP48540 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
GdnfP48540 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GdnfP48540 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GdnfP48540 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
GdnfP48540 Flvcr1-202ENSMUST00000191946 1216 ntBASIC16.27■□□□□ 0.2
GdnfP48540 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GdnfP48540 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GdnfP48540 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GdnfP48540 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.27■□□□□ 0.19
GdnfP48540 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.27■□□□□ 0.19
GdnfP48540 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.27■□□□□ 0.19
GdnfP48540 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.27■□□□□ 0.19
GdnfP48540 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GdnfP48540 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
GdnfP48540 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
GdnfP48540 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GdnfP48540 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GdnfP48540 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GdnfP48540 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GdnfP48540 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GdnfP48540 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
GdnfP48540 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GdnfP48540 Gm7160-202ENSMUST00000188519 1027 ntBASIC16.26■□□□□ 0.19
GdnfP48540 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GdnfP48540 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GdnfP48540 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GdnfP48540 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
GdnfP48540 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GdnfP48540 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GdnfP48540 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GdnfP48540 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GdnfP48540 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
GdnfP48540 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
GdnfP48540 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GdnfP48540 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms