Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Abca1P41233 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Abca1P41233 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Abca1P41233 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.44■□□□□ 0.06
Abca1P41233 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Abca1P41233 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.44■□□□□ 0.06
Abca1P41233 Gm6576-201ENSMUST00000169678 883 ntBASIC15.44■□□□□ 0.06
Abca1P41233 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Abca1P41233 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Abca1P41233 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Abca1P41233 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Abca1P41233 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Abca1P41233 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Abca1P41233 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Abca1P41233 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.43■□□□□ 0.06
Abca1P41233 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Abca1P41233 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Abca1P41233 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Abca1P41233 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Abca1P41233 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Abca1P41233 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Abca1P41233 AA386476-201ENSMUST00000098781 1665 ntBASIC15.43■□□□□ 0.06
Abca1P41233 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Abca1P41233 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Abca1P41233 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Abca1P41233 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Abca1P41233 Gm43909-201ENSMUST00000203443 1876 ntBASIC15.43■□□□□ 0.06
Abca1P41233 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Abca1P41233 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.42■□□□□ 0.06
Abca1P41233 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Abca1P41233 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Abca1P41233 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
Abca1P41233 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Abca1P41233 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.42■□□□□ 0.06
Abca1P41233 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Abca1P41233 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Abca1P41233 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Abca1P41233 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Abca1P41233 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Abca1P41233 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Abca1P41233 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Abca1P41233 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Abca1P41233 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
Abca1P41233 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Abca1P41233 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Abca1P41233 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Abca1P41233 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Abca1P41233 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Abca1P41233 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Abca1P41233 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Abca1P41233 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Abca1P41233 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Abca1P41233 AC131586.2-201ENSMUST00000228370 1512 ntBASIC15.41■□□□□ 0.06
Abca1P41233 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Abca1P41233 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
Abca1P41233 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.41■□□□□ 0.06
Abca1P41233 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Abca1P41233 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Abca1P41233 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Abca1P41233 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Abca1P41233 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Abca1P41233 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Abca1P41233 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.41■□□□□ 0.06
Abca1P41233 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Abca1P41233 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Abca1P41233 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Abca1P41233 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.41■□□□□ 0.06
Abca1P41233 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.41■□□□□ 0.06
Abca1P41233 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Abca1P41233 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Abca1P41233 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Abca1P41233 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.4■□□□□ 0.06
Abca1P41233 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Abca1P41233 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Abca1P41233 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Abca1P41233 Gm34220-201ENSMUST00000223001 2709 ntBASIC15.4■□□□□ 0.06
Abca1P41233 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
Abca1P41233 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Abca1P41233 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Abca1P41233 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Abca1P41233 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Abca1P41233 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Abca1P41233 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Abca1P41233 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Abca1P41233 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Abca1P41233 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Abca1P41233 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Abca1P41233 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Abca1P41233 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Abca1P41233 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Abca1P41233 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Abca1P41233 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Abca1P41233 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC15.39■□□□□ 0.05
Abca1P41233 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Abca1P41233 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Abca1P41233 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC15.38■□□□□ 0.05
Abca1P41233 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.38■□□□□ 0.05
Abca1P41233 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Abca1P41233 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.38■□□□□ 0.05
Abca1P41233 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms