Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Upk2P38575 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Upk2P38575 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.41■□□□□ 0.22
Upk2P38575 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Upk2P38575 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Upk2P38575 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Upk2P38575 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.41■□□□□ 0.22
Upk2P38575 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Upk2P38575 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Upk2P38575 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Upk2P38575 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Upk2P38575 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Upk2P38575 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Upk2P38575 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Upk2P38575 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC16.4■□□□□ 0.22
Upk2P38575 Gm13534-201ENSMUST00000121169 513 ntBASIC16.4■□□□□ 0.22
Upk2P38575 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Upk2P38575 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Upk2P38575 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Upk2P38575 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Upk2P38575 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.4■□□□□ 0.22
Upk2P38575 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.4■□□□□ 0.22
Upk2P38575 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Upk2P38575 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.4■□□□□ 0.22
Upk2P38575 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.39■□□□□ 0.21
Upk2P38575 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.39■□□□□ 0.21
Upk2P38575 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.39■□□□□ 0.21
Upk2P38575 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Upk2P38575 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Upk2P38575 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Upk2P38575 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.39■□□□□ 0.21
Upk2P38575 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Upk2P38575 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Upk2P38575 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.39■□□□□ 0.21
Upk2P38575 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.39■□□□□ 0.21
Upk2P38575 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.39■□□□□ 0.21
Upk2P38575 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Upk2P38575 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Upk2P38575 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.38■□□□□ 0.21
Upk2P38575 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Upk2P38575 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.38■□□□□ 0.21
Upk2P38575 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Upk2P38575 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Upk2P38575 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Upk2P38575 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Upk2P38575 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.38■□□□□ 0.21
Upk2P38575 Gm42778-201ENSMUST00000199644 553 ntBASIC16.38■□□□□ 0.21
Upk2P38575 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Upk2P38575 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Upk2P38575 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Upk2P38575 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Upk2P38575 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upk2P38575 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Upk2P38575 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upk2P38575 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Upk2P38575 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Upk2P38575 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.37■□□□□ 0.21
Upk2P38575 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.37■□□□□ 0.21
Upk2P38575 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.37■□□□□ 0.21
Upk2P38575 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
Upk2P38575 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upk2P38575 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upk2P38575 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Upk2P38575 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Upk2P38575 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Upk2P38575 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upk2P38575 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upk2P38575 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Upk2P38575 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Upk2P38575 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
Upk2P38575 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Upk2P38575 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Upk2P38575 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Upk2P38575 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk2P38575 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.35■□□□□ 0.21
Upk2P38575 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk2P38575 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk2P38575 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Upk2P38575 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.35■□□□□ 0.21
Upk2P38575 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16.35■□□□□ 0.21
Upk2P38575 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk2P38575 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.35■□□□□ 0.21
Upk2P38575 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Upk2P38575 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk2P38575 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk2P38575 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk2P38575 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Upk2P38575 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk2P38575 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk2P38575 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upk2P38575 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Upk2P38575 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upk2P38575 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Upk2P38575 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Upk2P38575 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
Upk2P38575 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.34■□□□□ 0.21
Upk2P38575 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upk2P38575 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upk2P38575 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upk2P38575 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms