Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LdlrP35951 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LdlrP35951 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LdlrP35951 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.54■□□□□ 0.56
LdlrP35951 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LdlrP35951 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LdlrP35951 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
LdlrP35951 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.54■□□□□ 0.56
LdlrP35951 Gm42642-201ENSMUST00000200683 355 ntBASIC18.54■□□□□ 0.56
LdlrP35951 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
LdlrP35951 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.54■□□□□ 0.56
LdlrP35951 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LdlrP35951 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LdlrP35951 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LdlrP35951 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LdlrP35951 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LdlrP35951 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LdlrP35951 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LdlrP35951 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
LdlrP35951 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LdlrP35951 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.53■□□□□ 0.56
LdlrP35951 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LdlrP35951 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LdlrP35951 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.53■□□□□ 0.56
LdlrP35951 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LdlrP35951 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.53■□□□□ 0.56
LdlrP35951 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LdlrP35951 Gm37179-201ENSMUST00000194862 823 ntBASIC18.53■□□□□ 0.56
LdlrP35951 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.53■□□□□ 0.56
LdlrP35951 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.53■□□□□ 0.56
LdlrP35951 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.53■□□□□ 0.56
LdlrP35951 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LdlrP35951 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LdlrP35951 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
LdlrP35951 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
LdlrP35951 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LdlrP35951 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LdlrP35951 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LdlrP35951 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LdlrP35951 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.52■□□□□ 0.56
LdlrP35951 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
LdlrP35951 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LdlrP35951 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LdlrP35951 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LdlrP35951 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LdlrP35951 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
LdlrP35951 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LdlrP35951 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LdlrP35951 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
LdlrP35951 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LdlrP35951 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
LdlrP35951 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
LdlrP35951 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LdlrP35951 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LdlrP35951 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.52■□□□□ 0.55
LdlrP35951 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.51■□□□□ 0.55
LdlrP35951 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LdlrP35951 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LdlrP35951 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LdlrP35951 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LdlrP35951 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LdlrP35951 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.51■□□□□ 0.55
LdlrP35951 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
LdlrP35951 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
LdlrP35951 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LdlrP35951 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
LdlrP35951 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.51■□□□□ 0.55
LdlrP35951 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LdlrP35951 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LdlrP35951 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LdlrP35951 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
LdlrP35951 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LdlrP35951 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LdlrP35951 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.5■□□□□ 0.55
LdlrP35951 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.5■□□□□ 0.55
LdlrP35951 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LdlrP35951 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LdlrP35951 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LdlrP35951 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LdlrP35951 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.5■□□□□ 0.55
LdlrP35951 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LdlrP35951 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
LdlrP35951 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LdlrP35951 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LdlrP35951 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.49■□□□□ 0.55
LdlrP35951 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LdlrP35951 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LdlrP35951 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LdlrP35951 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LdlrP35951 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LdlrP35951 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LdlrP35951 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LdlrP35951 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LdlrP35951 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LdlrP35951 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
LdlrP35951 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LdlrP35951 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LdlrP35951 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.49■□□□□ 0.55
LdlrP35951 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.49■□□□□ 0.55
LdlrP35951 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms