Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rab5cP35278 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
Rab5cP35278 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rab5cP35278 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Rab5cP35278 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rab5cP35278 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rab5cP35278 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rab5cP35278 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rab5cP35278 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC15.27■□□□□ 0.03
Rab5cP35278 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rab5cP35278 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rab5cP35278 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rab5cP35278 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rab5cP35278 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab5cP35278 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab5cP35278 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab5cP35278 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rab5cP35278 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab5cP35278 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC15.26■□□□□ 0.03
Rab5cP35278 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rab5cP35278 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab5cP35278 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab5cP35278 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rab5cP35278 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rab5cP35278 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab5cP35278 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab5cP35278 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab5cP35278 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rab5cP35278 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rab5cP35278 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rab5cP35278 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab5cP35278 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab5cP35278 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rab5cP35278 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab5cP35278 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab5cP35278 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.25■□□□□ 0.03
Rab5cP35278 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab5cP35278 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.25■□□□□ 0.03
Rab5cP35278 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Rab5cP35278 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rab5cP35278 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab5cP35278 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.25■□□□□ 0.03
Rab5cP35278 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab5cP35278 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab5cP35278 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab5cP35278 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab5cP35278 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab5cP35278 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rab5cP35278 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab5cP35278 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Rab5cP35278 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab5cP35278 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC15.24■□□□□ 0.03
Rab5cP35278 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab5cP35278 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab5cP35278 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rab5cP35278 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab5cP35278 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab5cP35278 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Rab5cP35278 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab5cP35278 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Rab5cP35278 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
Rab5cP35278 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab5cP35278 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab5cP35278 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab5cP35278 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab5cP35278 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Rab5cP35278 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab5cP35278 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.23■□□□□ 0.03
Rab5cP35278 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.23■□□□□ 0.03
Rab5cP35278 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab5cP35278 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Rab5cP35278 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rab5cP35278 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab5cP35278 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab5cP35278 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab5cP35278 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.23■□□□□ 0.03
Rab5cP35278 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab5cP35278 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Rab5cP35278 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab5cP35278 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab5cP35278 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab5cP35278 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC15.22■□□□□ 0.03
Rab5cP35278 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab5cP35278 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab5cP35278 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC15.22■□□□□ 0.03
Rab5cP35278 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Rab5cP35278 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab5cP35278 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab5cP35278 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab5cP35278 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab5cP35278 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Rab5cP35278 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab5cP35278 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab5cP35278 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab5cP35278 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Rab5cP35278 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Rab5cP35278 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Rab5cP35278 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rab5cP35278 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rab5cP35278 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms