Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.84■□□□□ 0.45
BdnfP21237 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.84■□□□□ 0.45
BdnfP21237 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
BdnfP21237 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.45
BdnfP21237 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
BdnfP21237 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
BdnfP21237 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
BdnfP21237 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BdnfP21237 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BdnfP21237 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
BdnfP21237 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
BdnfP21237 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.83■□□□□ 0.44
BdnfP21237 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
BdnfP21237 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BdnfP21237 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BdnfP21237 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
BdnfP21237 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BdnfP21237 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
BdnfP21237 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
BdnfP21237 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BdnfP21237 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
BdnfP21237 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.82■□□□□ 0.44
BdnfP21237 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
BdnfP21237 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BdnfP21237 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.82■□□□□ 0.44
BdnfP21237 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BdnfP21237 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
BdnfP21237 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.82■□□□□ 0.44
BdnfP21237 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BdnfP21237 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
BdnfP21237 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BdnfP21237 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.82■□□□□ 0.44
BdnfP21237 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BdnfP21237 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.81■□□□□ 0.44
BdnfP21237 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
BdnfP21237 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BdnfP21237 Gm27454-201ENSMUST00000185090 204 ntBASIC17.81■□□□□ 0.44
BdnfP21237 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.81■□□□□ 0.44
BdnfP21237 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BdnfP21237 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.81■□□□□ 0.44
BdnfP21237 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BdnfP21237 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BdnfP21237 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
BdnfP21237 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BdnfP21237 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BdnfP21237 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BdnfP21237 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
BdnfP21237 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BdnfP21237 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
BdnfP21237 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
BdnfP21237 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BdnfP21237 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BdnfP21237 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BdnfP21237 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
BdnfP21237 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.8■□□□□ 0.44
BdnfP21237 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BdnfP21237 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BdnfP21237 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.8■□□□□ 0.44
BdnfP21237 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
BdnfP21237 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BdnfP21237 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BdnfP21237 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BdnfP21237 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BdnfP21237 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
BdnfP21237 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.79■□□□□ 0.44
BdnfP21237 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
BdnfP21237 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
BdnfP21237 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BdnfP21237 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BdnfP21237 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
BdnfP21237 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
BdnfP21237 Smad6-203ENSMUST00000179458 273 ntBASIC17.79■□□□□ 0.44
BdnfP21237 Gm8493-201ENSMUST00000196881 489 ntBASIC17.79■□□□□ 0.44
BdnfP21237 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.79■□□□□ 0.44
BdnfP21237 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
BdnfP21237 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
BdnfP21237 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BdnfP21237 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.79■□□□□ 0.44
BdnfP21237 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BdnfP21237 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BdnfP21237 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
BdnfP21237 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
BdnfP21237 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BdnfP21237 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BdnfP21237 Gm12821-201ENSMUST00000120022 600 ntBASIC17.78■□□□□ 0.44
BdnfP21237 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BdnfP21237 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BdnfP21237 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
BdnfP21237 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
BdnfP21237 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
BdnfP21237 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.78■□□□□ 0.44
BdnfP21237 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BdnfP21237 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
BdnfP21237 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
BdnfP21237 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.77■□□□□ 0.44
BdnfP21237 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BdnfP21237 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.77■□□□□ 0.44
BdnfP21237 Gm43173-201ENSMUST00000202246 593 ntBASIC17.77■□□□□ 0.44
BdnfP21237 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.77■□□□□ 0.44
BdnfP21237 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms