Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Gm37035-201ENSMUST00000194809 2148 ntBASIC15.11■□□□□ 0.01
Tnfrsf9P20334 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf9P20334 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Tnfrsf9P20334 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf9P20334 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tnfrsf9P20334 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf9P20334 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf9P20334 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf9P20334 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf9P20334 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf9P20334 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf9P20334 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf9P20334 Gm6420-201ENSMUST00000193885 723 ntBASIC15.1■□□□□ 0.01
Tnfrsf9P20334 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf9P20334 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf9P20334 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf9P20334 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf9P20334 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Tnfrsf9P20334 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf9P20334 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tnfrsf9P20334 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf9P20334 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf9P20334 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf9P20334 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC15.09■□□□□ 0.01
Tnfrsf9P20334 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf9P20334 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Tnfrsf9P20334 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf9P20334 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Tnfrsf9P20334 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf9P20334 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC15.09■□□□□ 0.01
Tnfrsf9P20334 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf9P20334 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf9P20334 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf9P20334 Gm7977-201ENSMUST00000193787 748 ntBASIC15.09■□□□□ 0.01
Tnfrsf9P20334 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC15.09■□□□□ 0.01
Tnfrsf9P20334 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf9P20334 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf9P20334 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf9P20334 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf9P20334 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf9P20334 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Tnfrsf9P20334 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf9P20334 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf9P20334 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tnfrsf9P20334 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tnfrsf9P20334 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tnfrsf9P20334 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tnfrsf9P20334 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Tnfrsf9P20334 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tnfrsf9P20334 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
Tnfrsf9P20334 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC15.08■□□□□ 0
Tnfrsf9P20334 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tnfrsf9P20334 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Tnfrsf9P20334 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
Tnfrsf9P20334 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC15.08■□□□□ 0
Tnfrsf9P20334 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC15.08■□□□□ 0
Tnfrsf9P20334 Gm37856-201ENSMUST00000191634 999 ntBASIC15.08■□□□□ 0
Tnfrsf9P20334 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.08■□□□□ 0
Tnfrsf9P20334 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tnfrsf9P20334 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Tnfrsf9P20334 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.08■□□□□ 0
Tnfrsf9P20334 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.08■□□□□ 0
Tnfrsf9P20334 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tnfrsf9P20334 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tnfrsf9P20334 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf9P20334 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Tnfrsf9P20334 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Tnfrsf9P20334 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf9P20334 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC15.07■□□□□ 0
Tnfrsf9P20334 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.07■□□□□ 0
Tnfrsf9P20334 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf9P20334 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.07■□□□□ 0
Tnfrsf9P20334 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf9P20334 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf9P20334 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Tnfrsf9P20334 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.07■□□□□ 0
Tnfrsf9P20334 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf9P20334 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf9P20334 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf9P20334 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Tnfrsf9P20334 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf9P20334 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tnfrsf9P20334 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf9P20334 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf9P20334 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf9P20334 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Tnfrsf9P20334 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Tnfrsf9P20334 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf9P20334 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf9P20334 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Tnfrsf9P20334 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf9P20334 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.06■□□□□ 0
Tnfrsf9P20334 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.06■□□□□ 0
Tnfrsf9P20334 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf9P20334 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC15.06■□□□□ 0
Tnfrsf9P20334 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf9P20334 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf9P20334 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf9P20334 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Tnfrsf9P20334 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms