Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgn1P18608 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hmgn1P18608 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Hmgn1P18608 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgn1P18608 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgn1P18608 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgn1P18608 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgn1P18608 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgn1P18608 Gm12922-201ENSMUST00000120626 809 ntBASIC17.07■□□□□ 0.32
Hmgn1P18608 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgn1P18608 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Hmgn1P18608 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgn1P18608 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.07■□□□□ 0.32
Hmgn1P18608 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgn1P18608 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgn1P18608 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Hmgn1P18608 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgn1P18608 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmgn1P18608 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Hmgn1P18608 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgn1P18608 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgn1P18608 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgn1P18608 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.06■□□□□ 0.32
Hmgn1P18608 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.06■□□□□ 0.32
Hmgn1P18608 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgn1P18608 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgn1P18608 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgn1P18608 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Hmgn1P18608 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgn1P18608 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmgn1P18608 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Hmgn1P18608 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgn1P18608 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgn1P18608 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Hmgn1P18608 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgn1P18608 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Hmgn1P18608 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgn1P18608 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgn1P18608 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Hmgn1P18608 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgn1P18608 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgn1P18608 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgn1P18608 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgn1P18608 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgn1P18608 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hmgn1P18608 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Hmgn1P18608 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.04■□□□□ 0.32
Hmgn1P18608 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Hmgn1P18608 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgn1P18608 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgn1P18608 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.04■□□□□ 0.32
Hmgn1P18608 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgn1P18608 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.04■□□□□ 0.32
Hmgn1P18608 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgn1P18608 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgn1P18608 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgn1P18608 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.04■□□□□ 0.32
Hmgn1P18608 Spcs1-204ENSMUST00000226782 949 ntBASIC17.04■□□□□ 0.32
Hmgn1P18608 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgn1P18608 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgn1P18608 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgn1P18608 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Hmgn1P18608 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.04■□□□□ 0.32
Hmgn1P18608 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgn1P18608 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgn1P18608 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgn1P18608 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgn1P18608 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hmgn1P18608 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgn1P18608 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgn1P18608 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgn1P18608 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Hmgn1P18608 Gm7860-201ENSMUST00000121190 879 ntBASIC17.03■□□□□ 0.32
Hmgn1P18608 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.03■□□□□ 0.32
Hmgn1P18608 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.03■□□□□ 0.32
Hmgn1P18608 Gm45102-201ENSMUST00000207427 857 ntBASIC17.03■□□□□ 0.32
Hmgn1P18608 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgn1P18608 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Hmgn1P18608 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgn1P18608 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgn1P18608 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgn1P18608 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgn1P18608 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgn1P18608 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgn1P18608 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgn1P18608 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgn1P18608 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hmgn1P18608 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgn1P18608 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.02■□□□□ 0.32
Hmgn1P18608 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.02■□□□□ 0.32
Hmgn1P18608 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgn1P18608 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
Hmgn1P18608 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgn1P18608 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgn1P18608 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hmgn1P18608 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hmgn1P18608 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Hmgn1P18608 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hmgn1P18608 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hmgn1P18608 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms