Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl1P10146 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC14.53□□□□□ -0.08
Ccl1P10146 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Ccl1P10146 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl1P10146 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl1P10146 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.53□□□□□ -0.08
Ccl1P10146 Gm42922-201ENSMUST00000195887 2078 ntBASIC14.53□□□□□ -0.08
Ccl1P10146 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl1P10146 Gm15853-202ENSMUST00000195518 2041 ntBASIC14.53□□□□□ -0.08
Ccl1P10146 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl1P10146 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccl1P10146 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Ccl1P10146 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ccl1P10146 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccl1P10146 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccl1P10146 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccl1P10146 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl1P10146 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC14.52□□□□□ -0.09
Ccl1P10146 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl1P10146 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl1P10146 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Ccl1P10146 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl1P10146 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl1P10146 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC14.52□□□□□ -0.09
Ccl1P10146 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl1P10146 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl1P10146 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl1P10146 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl1P10146 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl1P10146 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ccl1P10146 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Ccl1P10146 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Ccl1P10146 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ccl1P10146 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl1P10146 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl1P10146 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl1P10146 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Ccl1P10146 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl1P10146 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl1P10146 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl1P10146 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl1P10146 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC14.51□□□□□ -0.09
Ccl1P10146 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl1P10146 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Ccl1P10146 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl1P10146 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl1P10146 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl1P10146 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl1P10146 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl1P10146 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ccl1P10146 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Ccl1P10146 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl1P10146 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl1P10146 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl1P10146 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl1P10146 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl1P10146 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl1P10146 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl1P10146 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl1P10146 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl1P10146 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC14.5□□□□□ -0.09
Ccl1P10146 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl1P10146 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC14.5□□□□□ -0.09
Ccl1P10146 AC154266.1-201ENSMUST00000223190 503 ntBASIC14.5□□□□□ -0.09
Ccl1P10146 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC14.5□□□□□ -0.09
Ccl1P10146 Gm10571-201ENSMUST00000097869 1638 ntBASIC14.5□□□□□ -0.09
Ccl1P10146 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Ccl1P10146 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl1P10146 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl1P10146 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl1P10146 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.5□□□□□ -0.09
Ccl1P10146 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.5□□□□□ -0.09
Ccl1P10146 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ccl1P10146 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Ccl1P10146 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Ccl1P10146 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl1P10146 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl1P10146 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl1P10146 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ccl1P10146 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl1P10146 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl1P10146 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC14.49□□□□□ -0.09
Ccl1P10146 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC14.49□□□□□ -0.09
Ccl1P10146 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Ccl1P10146 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Ccl1P10146 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl1P10146 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ccl1P10146 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Ccl1P10146 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccl1P10146 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ccl1P10146 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl1P10146 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl1P10146 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl1P10146 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl1P10146 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl1P10146 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl1P10146 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccl1P10146 Gm32699-201ENSMUST00000221728 1988 ntBASIC14.48□□□□□ -0.09
Ccl1P10146 Etf1-202ENSMUST00000180351 108 ntBASIC14.48□□□□□ -0.09
Ccl1P10146 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms