Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Rc3h2P0C090 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Rc3h2P0C090 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rc3h2P0C090 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Rc3h2P0C090 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19■□□□□ 0.63
Rc3h2P0C090 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19■□□□□ 0.63
Rc3h2P0C090 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19■□□□□ 0.63
Rc3h2P0C090 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rc3h2P0C090 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19■□□□□ 0.63
Rc3h2P0C090 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Rc3h2P0C090 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rc3h2P0C090 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rc3h2P0C090 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rc3h2P0C090 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rc3h2P0C090 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rc3h2P0C090 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rc3h2P0C090 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rc3h2P0C090 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rc3h2P0C090 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rc3h2P0C090 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.99■□□□□ 0.63
Rc3h2P0C090 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.99■□□□□ 0.63
Rc3h2P0C090 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Rc3h2P0C090 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rc3h2P0C090 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rc3h2P0C090 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rc3h2P0C090 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rc3h2P0C090 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rc3h2P0C090 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Rc3h2P0C090 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rc3h2P0C090 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rc3h2P0C090 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Rc3h2P0C090 Gm27275-201ENSMUST00000184318 272 ntBASIC18.98■□□□□ 0.63
Rc3h2P0C090 Gm2559-201ENSMUST00000201323 363 ntBASIC18.98■□□□□ 0.63
Rc3h2P0C090 Gm44549-201ENSMUST00000208351 577 ntBASIC18.98■□□□□ 0.63
Rc3h2P0C090 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
Rc3h2P0C090 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rc3h2P0C090 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rc3h2P0C090 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rc3h2P0C090 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rc3h2P0C090 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rc3h2P0C090 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
Rc3h2P0C090 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rc3h2P0C090 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rc3h2P0C090 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rc3h2P0C090 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rc3h2P0C090 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.97■□□□□ 0.63
Rc3h2P0C090 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.97■□□□□ 0.63
Rc3h2P0C090 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rc3h2P0C090 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.97■□□□□ 0.63
Rc3h2P0C090 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Rc3h2P0C090 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rc3h2P0C090 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rc3h2P0C090 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rc3h2P0C090 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rc3h2P0C090 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rc3h2P0C090 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rc3h2P0C090 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rc3h2P0C090 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.96■□□□□ 0.63
Rc3h2P0C090 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rc3h2P0C090 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rc3h2P0C090 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rc3h2P0C090 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Rc3h2P0C090 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Rc3h2P0C090 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Rc3h2P0C090 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rc3h2P0C090 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rc3h2P0C090 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rc3h2P0C090 Dio3-201ENSMUST00000097228 1449 ntBASIC18.95■□□□□ 0.62
Rc3h2P0C090 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.95■□□□□ 0.62
Rc3h2P0C090 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.95■□□□□ 0.62
Rc3h2P0C090 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rc3h2P0C090 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Rc3h2P0C090 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rc3h2P0C090 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rc3h2P0C090 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rc3h2P0C090 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rc3h2P0C090 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rc3h2P0C090 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Rc3h2P0C090 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rc3h2P0C090 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Rc3h2P0C090 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
Rc3h2P0C090 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Rc3h2P0C090 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rc3h2P0C090 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rc3h2P0C090 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Rc3h2P0C090 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rc3h2P0C090 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rc3h2P0C090 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.94■□□□□ 0.62
Rc3h2P0C090 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rc3h2P0C090 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Rc3h2P0C090 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rc3h2P0C090 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rc3h2P0C090 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rc3h2P0C090 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rc3h2P0C090 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rc3h2P0C090 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Rc3h2P0C090 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Rc3h2P0C090 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rc3h2P0C090 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rc3h2P0C090 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms