Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04940 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
P04940 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
P04940 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
P04940 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
P04940 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC15.18■□□□□ 0.02
P04940 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.18■□□□□ 0.02
P04940 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04940 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04940 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04940 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
P04940 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
P04940 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04940 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC15.18■□□□□ 0.02
P04940 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC15.18■□□□□ 0.02
P04940 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04940 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04940 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04940 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
P04940 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04940 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04940 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04940 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.17■□□□□ 0.02
P04940 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04940 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P04940 Gm10167-201ENSMUST00000150411 1479 ntBASIC15.17■□□□□ 0.02
P04940 Gm10655-201ENSMUST00000098658 1397 ntBASIC15.17■□□□□ 0.02
P04940 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.17■□□□□ 0.02
P04940 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC15.17■□□□□ 0.02
P04940 Gm10033-202ENSMUST00000211874 928 ntBASIC15.17■□□□□ 0.02
P04940 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04940 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04940 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P04940 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
P04940 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
P04940 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04940 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
P04940 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04940 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
P04940 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
P04940 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04940 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04940 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04940 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04940 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
P04940 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.16■□□□□ 0.02
P04940 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04940 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.16■□□□□ 0.02
P04940 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04940 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P04940 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04940 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04940 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04940 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04940 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04940 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04940 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04940 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04940 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC15.15■□□□□ 0.02
P04940 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04940 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
P04940 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC15.15■□□□□ 0.02
P04940 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
P04940 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04940 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04940 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04940 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04940 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04940 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
P04940 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04940 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04940 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04940 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04940 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04940 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04940 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04940 Gm5874-201ENSMUST00000096101 508 ntBASIC15.14■□□□□ 0.01
P04940 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
P04940 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04940 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P04940 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.13■□□□□ 0.01
P04940 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04940 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
P04940 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
P04940 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC15.13■□□□□ 0.01
P04940 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04940 Ap3s1-204ENSMUST00000225520 957 ntBASIC15.13■□□□□ 0.01
P04940 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04940 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04940 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04940 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04940 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P04940 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P04940 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC15.12■□□□□ 0.01
P04940 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P04940 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
P04940 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
P04940 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
P04940 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.12■□□□□ 0.01
P04940 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 176.7 ms