Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.72■□□□□ 0.75
P04214 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.72■□□□□ 0.75
P04214 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
P04214 Gm30025-201ENSMUST00000218555 728 ntBASIC19.72■□□□□ 0.75
P04214 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
P04214 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
P04214 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
P04214 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
P04214 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.71■□□□□ 0.75
P04214 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
P04214 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
P04214 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
P04214 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
P04214 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.71■□□□□ 0.75
P04214 Zfp783-201ENSMUST00000095946 670 ntBASIC19.71■□□□□ 0.75
P04214 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.71■□□□□ 0.75
P04214 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
P04214 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
P04214 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
P04214 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
P04214 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
P04214 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.7■□□□□ 0.74
P04214 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
P04214 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
P04214 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.7■□□□□ 0.74
P04214 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.7■□□□□ 0.74
P04214 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.7■□□□□ 0.74
P04214 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
P04214 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.7■□□□□ 0.74
P04214 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
P04214 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
P04214 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
P04214 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
P04214 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
P04214 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
P04214 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
P04214 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
P04214 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
P04214 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
P04214 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
P04214 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.68■□□□□ 0.74
P04214 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.68■□□□□ 0.74
P04214 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
P04214 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.68■□□□□ 0.74
P04214 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.68■□□□□ 0.74
P04214 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
P04214 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
P04214 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.68■□□□□ 0.74
P04214 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
P04214 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
P04214 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
P04214 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
P04214 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.67■□□□□ 0.74
P04214 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
P04214 Gm10138-203ENSMUST00000206952 366 ntBASIC19.67■□□□□ 0.74
P04214 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
P04214 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
P04214 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.67■□□□□ 0.74
P04214 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
P04214 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
P04214 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.67■□□□□ 0.74
P04214 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
P04214 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
P04214 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
P04214 Gm13559-201ENSMUST00000120476 863 ntBASIC19.66■□□□□ 0.74
P04214 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.66■□□□□ 0.74
P04214 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.66■□□□□ 0.74
P04214 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
P04214 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
P04214 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.66■□□□□ 0.74
P04214 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
P04214 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
P04214 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
P04214 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
P04214 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
P04214 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.65■□□□□ 0.74
P04214 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
P04214 Gm18025-201ENSMUST00000221733 862 ntBASIC19.65■□□□□ 0.74
P04214 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
P04214 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
P04214 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
P04214 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
P04214 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
P04214 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
P04214 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.64■□□□□ 0.73
P04214 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
P04214 Gm21362-201ENSMUST00000194272 928 ntBASIC19.64■□□□□ 0.73
P04214 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.64■□□□□ 0.73
P04214 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
P04214 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
P04214 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
P04214 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
P04214 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
P04214 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
P04214 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
P04214 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
P04214 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
P04214 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.63■□□□□ 0.73
P04214 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.63■□□□□ 0.73
P04214 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms