Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hbb-b1P02088 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hbb-b1P02088 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hbb-b1P02088 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Hbb-b1P02088 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC13.23□□□□□ -0.29
Hbb-b1P02088 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hbb-b1P02088 Gm5828-201ENSMUST00000071842 1860 ntBASIC13.23□□□□□ -0.29
Hbb-b1P02088 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hbb-b1P02088 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hbb-b1P02088 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hbb-b1P02088 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hbb-b1P02088 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Hbb-b1P02088 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hbb-b1P02088 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hbb-b1P02088 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hbb-b1P02088 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hbb-b1P02088 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hbb-b1P02088 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hbb-b1P02088 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Hbb-b1P02088 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hbb-b1P02088 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hbb-b1P02088 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.23□□□□□ -0.29
Hbb-b1P02088 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hbb-b1P02088 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hbb-b1P02088 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Hbb-b1P02088 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hbb-b1P02088 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Hbb-b1P02088 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hbb-b1P02088 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Hbb-b1P02088 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hbb-b1P02088 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Hbb-b1P02088 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hbb-b1P02088 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hbb-b1P02088 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hbb-b1P02088 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hbb-b1P02088 Mir6236-201ENSMUST00000184437 123 ntBASIC13.22□□□□□ -0.29
Hbb-b1P02088 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hbb-b1P02088 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hbb-b1P02088 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Hbb-b1P02088 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hbb-b1P02088 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Hbb-b1P02088 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hbb-b1P02088 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC13.22□□□□□ -0.29
Hbb-b1P02088 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hbb-b1P02088 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hbb-b1P02088 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.21□□□□□ -0.29
Hbb-b1P02088 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hbb-b1P02088 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Hbb-b1P02088 Gm37352-201ENSMUST00000193908 2181 ntBASIC13.21□□□□□ -0.29
Hbb-b1P02088 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hbb-b1P02088 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hbb-b1P02088 Fcho2-208ENSMUST00000224992 2964 ntBASIC13.21□□□□□ -0.29
Hbb-b1P02088 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hbb-b1P02088 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hbb-b1P02088 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hbb-b1P02088 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Hbb-b1P02088 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Hbb-b1P02088 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Hbb-b1P02088 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hbb-b1P02088 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hbb-b1P02088 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hbb-b1P02088 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hbb-b1P02088 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hbb-b1P02088 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Hbb-b1P02088 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hbb-b1P02088 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hbb-b1P02088 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Hbb-b1P02088 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Hbb-b1P02088 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hbb-b1P02088 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hbb-b1P02088 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hbb-b1P02088 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hbb-b1P02088 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hbb-b1P02088 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hbb-b1P02088 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hbb-b1P02088 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hbb-b1P02088 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hbb-b1P02088 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hbb-b1P02088 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hbb-b1P02088 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hbb-b1P02088 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hbb-b1P02088 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hbb-b1P02088 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hbb-b1P02088 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hbb-b1P02088 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hbb-b1P02088 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hbb-b1P02088 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hbb-b1P02088 Gm45412-201ENSMUST00000210217 2275 ntBASIC13.19□□□□□ -0.3
Hbb-b1P02088 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hbb-b1P02088 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Hbb-b1P02088 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hbb-b1P02088 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Hbb-b1P02088 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hbb-b1P02088 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hbb-b1P02088 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hbb-b1P02088 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hbb-b1P02088 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hbb-b1P02088 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hbb-b1P02088 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Hbb-b1P02088 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms