Protein–RNA interactions for Protein: P01878

Ig alpha chain C region, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01878 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
P01878 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
P01878 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
P01878 Gm11927-201ENSMUST00000118472 759 ntBASIC19.37■□□□□ 0.69
P01878 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
P01878 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.37■□□□□ 0.69
P01878 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.37■□□□□ 0.69
P01878 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
P01878 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.37■□□□□ 0.69
P01878 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
P01878 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
P01878 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
P01878 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
P01878 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P01878 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
P01878 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
P01878 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.36■□□□□ 0.69
P01878 Gm15378-201ENSMUST00000121894 207 ntBASIC19.36■□□□□ 0.69
P01878 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
P01878 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.36■□□□□ 0.69
P01878 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
P01878 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.36■□□□□ 0.69
P01878 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P01878 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P01878 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P01878 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P01878 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P01878 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
P01878 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P01878 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P01878 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
P01878 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P01878 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
P01878 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
P01878 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
P01878 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P01878 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
P01878 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P01878 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
P01878 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
P01878 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
P01878 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
P01878 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P01878 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
P01878 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
P01878 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
P01878 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P01878 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.34■□□□□ 0.69
P01878 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P01878 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
P01878 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
P01878 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
P01878 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
P01878 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
P01878 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
P01878 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
P01878 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
P01878 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.33■□□□□ 0.68
P01878 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.33■□□□□ 0.68
P01878 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
P01878 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
P01878 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
P01878 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.33■□□□□ 0.68
P01878 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.33■□□□□ 0.68
P01878 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
P01878 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
P01878 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
P01878 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
P01878 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
P01878 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
P01878 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
P01878 Mir1199-201ENSMUST00000117015 119 ntBASIC19.32■□□□□ 0.68
P01878 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.32■□□□□ 0.68
P01878 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.32■□□□□ 0.68
P01878 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.32■□□□□ 0.68
P01878 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
P01878 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
P01878 Flg-201ENSMUST00000050758 1488 ntBASIC19.32■□□□□ 0.68
P01878 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
P01878 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
P01878 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
P01878 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
P01878 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.31■□□□□ 0.68
P01878 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P01878 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P01878 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
P01878 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.31■□□□□ 0.68
P01878 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
P01878 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
P01878 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.31■□□□□ 0.68
P01878 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P01878 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P01878 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
P01878 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
P01878 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P01878 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P01878 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P01878 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
P01878 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.3■□□□□ 0.68
P01878 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms