Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
P01852 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P01852 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P01852 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P01852 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P01852 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P01852 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17■□□□□ 0.31
P01852 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
P01852 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P01852 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P01852 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P01852 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
P01852 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.99■□□□□ 0.31
P01852 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
P01852 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
P01852 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
P01852 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
P01852 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
P01852 Gm6420-201ENSMUST00000193885 723 ntBASIC16.99■□□□□ 0.31
P01852 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
P01852 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
P01852 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
P01852 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
P01852 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
P01852 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
P01852 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.99■□□□□ 0.31
P01852 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
P01852 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.98■□□□□ 0.31
P01852 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
P01852 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
P01852 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
P01852 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.98■□□□□ 0.31
P01852 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
P01852 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
P01852 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
P01852 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
P01852 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
P01852 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
P01852 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
P01852 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
P01852 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
P01852 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
P01852 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
P01852 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
P01852 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.97■□□□□ 0.31
P01852 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
P01852 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
P01852 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
P01852 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
P01852 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
P01852 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.97■□□□□ 0.31
P01852 Gm12933-201ENSMUST00000120203 872 ntBASIC16.97■□□□□ 0.31
P01852 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.97■□□□□ 0.31
P01852 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.97■□□□□ 0.31
P01852 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
P01852 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
P01852 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
P01852 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
P01852 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
P01852 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
P01852 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
P01852 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
P01852 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
P01852 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
P01852 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
P01852 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
P01852 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
P01852 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
P01852 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
P01852 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
P01852 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
P01852 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
P01852 Nespas-201ENSMUST00000143738 1083 ntBASIC16.96■□□□□ 0.31
P01852 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
P01852 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.96■□□□□ 0.31
P01852 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
P01852 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
P01852 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
P01852 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
P01852 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
P01852 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
P01852 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
P01852 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
P01852 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.95■□□□□ 0.3
P01852 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
P01852 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
P01852 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
P01852 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.95■□□□□ 0.3
P01852 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.95■□□□□ 0.3
P01852 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
P01852 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.95■□□□□ 0.3
P01852 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
P01852 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
P01852 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
P01852 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
P01852 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P01852 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P01852 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
P01852 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
P01852 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms