Protein–RNA interactions for Protein: P01139

Ngf, Beta-nerve growth factor, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NgfP01139 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NgfP01139 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NgfP01139 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NgfP01139 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NgfP01139 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NgfP01139 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NgfP01139 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NgfP01139 Flg-201ENSMUST00000050758 1488 ntBASIC16.58■□□□□ 0.24
NgfP01139 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NgfP01139 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NgfP01139 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NgfP01139 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.57■□□□□ 0.24
NgfP01139 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
NgfP01139 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
NgfP01139 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NgfP01139 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NgfP01139 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NgfP01139 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NgfP01139 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NgfP01139 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.57■□□□□ 0.24
NgfP01139 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NgfP01139 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.57■□□□□ 0.24
NgfP01139 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
NgfP01139 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NgfP01139 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
NgfP01139 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NgfP01139 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
NgfP01139 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NgfP01139 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NgfP01139 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NgfP01139 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
NgfP01139 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NgfP01139 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.56■□□□□ 0.24
NgfP01139 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.56■□□□□ 0.24
NgfP01139 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.56■□□□□ 0.24
NgfP01139 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NgfP01139 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NgfP01139 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NgfP01139 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NgfP01139 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NgfP01139 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.56■□□□□ 0.24
NgfP01139 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NgfP01139 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NgfP01139 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NgfP01139 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NgfP01139 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.55■□□□□ 0.24
NgfP01139 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.55■□□□□ 0.24
NgfP01139 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NgfP01139 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NgfP01139 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NgfP01139 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
NgfP01139 Gm715-201ENSMUST00000117865 831 ntBASIC16.55■□□□□ 0.24
NgfP01139 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NgfP01139 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.55■□□□□ 0.24
NgfP01139 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.55■□□□□ 0.24
NgfP01139 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.55■□□□□ 0.24
NgfP01139 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.55■□□□□ 0.24
NgfP01139 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NgfP01139 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NgfP01139 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
NgfP01139 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
NgfP01139 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NgfP01139 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
NgfP01139 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NgfP01139 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NgfP01139 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NgfP01139 Gm11927-201ENSMUST00000118472 759 ntBASIC16.54■□□□□ 0.24
NgfP01139 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NgfP01139 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NgfP01139 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
NgfP01139 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NgfP01139 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
NgfP01139 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
NgfP01139 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NgfP01139 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NgfP01139 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NgfP01139 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
NgfP01139 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.53■□□□□ 0.24
NgfP01139 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
NgfP01139 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.53■□□□□ 0.24
NgfP01139 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.53■□□□□ 0.24
NgfP01139 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.53■□□□□ 0.24
NgfP01139 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NgfP01139 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NgfP01139 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NgfP01139 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.53■□□□□ 0.24
NgfP01139 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
NgfP01139 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.53■□□□□ 0.24
NgfP01139 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
NgfP01139 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NgfP01139 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NgfP01139 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NgfP01139 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
NgfP01139 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
NgfP01139 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NgfP01139 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NgfP01139 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NgfP01139 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
NgfP01139 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NgfP01139 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms